RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 SLC4A4Q9Y6R1 1079 aa15.3■□□□□ 0.04
TRIM40-206ENST00000376724 SEMA3EO15041 775 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 SYT1P21579 422 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 APOBRQ0VD83 1088 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 RALYLQ86SE5 291 aaKnown RBP15.29■□□□□ 0.04
TRIM40-206ENST00000376724 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 NAPBQ9H115 298 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-206ENST00000376724 LEMD3Q9Y2U8 911 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-206ENST00000376724 NCOA7Q8NI08 942 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 NBPF3Q9H094 633 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-206ENST00000376724 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
TRIM40-206ENST00000376724 WDR33Q9C0J8 1336 aaKnown RBP15.29■□□□□ 0.04
TRIM40-206ENST00000376724 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
TRIM40-206ENST00000376724 STX6O43752 255 aa15.28■□□□□ 0.04
TRIM40-206ENST00000376724 MMP10P09238 476 aa15.28■□□□□ 0.04
TRIM40-206ENST00000376724 EZH2Q15910 746 aaKnown RBP15.28■□□□□ 0.04
TRIM40-206ENST00000376724 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-206ENST00000376724 TBC1D10CQ8IV04 446 aa15.28■□□□□ 0.04
TRIM40-206ENST00000376724 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 BBOX1O75936 387 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 UFL1O94874 794 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 TDO2P48775 406 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 TRDNQ13061 729 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 GTF3C6Q969F1 213 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 GPHNQ9NQX3 736 aaPredicted RBP15.27■□□□□ 0.04
TRIM40-206ENST00000376724 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 IRS2Q9Y4H2 1338 aa15.27■□□□□ 0.04
TRIM40-206ENST00000376724 TNS1Q9HBL0 1735 aaKnown RBP15.27■□□□□ 0.03
TRIM40-206ENST00000376724 PRC1O43663 620 aa15.27■□□□□ 0.03
TRIM40-206ENST00000376724 GNAT2P19087 354 aa15.27■□□□□ 0.03
TRIM40-206ENST00000376724 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.03
TRIM40-206ENST00000376724 MCM5P33992 734 aa15.27■□□□□ 0.03
TRIM40-206ENST00000376724 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.03
TRIM40-206ENST00000376724 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.03
TRIM40-206ENST00000376724 PRDX5P30044 214 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 MECOMQ03112 1051 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 CTDSPL2Q05D32 466 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 SCRN1Q12765 414 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 ALX1Q15699 326 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 STK11IPQ8N1F8 1099 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 ZNF384Q8TF68 577 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 INCENPQ9NQS7 918 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 GGA1Q9UJY5 639 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 KLRG2A4D1S0 409 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 PRPF40AO75400 957 aaKnown RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 ZSCAN22P10073 491 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 PTMSP20962 102 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 NSUN4Q96CB9 384 aaKnown RBP15.26■□□□□ 0.03
TRIM40-206ENST00000376724 AGXT2Q9BYV1 514 aa15.26■□□□□ 0.03
TRIM40-206ENST00000376724 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
TRIM40-206ENST00000376724 JAK2O60674 1132 aa15.25■□□□□ 0.03
TRIM40-206ENST00000376724 ANTXR2P58335 489 aa15.25■□□□□ 0.03
TRIM40-206ENST00000376724 LARP1BQ659C4 914 aaKnown RBP15.25■□□□□ 0.03
TRIM40-206ENST00000376724 RTN4Q9NQC3 1192 aaKnown RBP15.25■□□□□ 0.03
TRIM40-206ENST00000376724 PDS5AQ29RF7 1337 aaKnown RBP15.24■□□□□ 0.03
TRIM40-206ENST00000376724 B4E1Z4 1266 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
TRIM40-206ENST00000376724 PFKFB2O60825 505 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 ATP2B4P23634 1241 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 NEDD4P46934 1319 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 C6orf229H3BNL8 230 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 PDIA3P30101 505 aaKnown RBP15.24■□□□□ 0.03
TRIM40-206ENST00000376724 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 DDX11Q96FC9 970 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
TRIM40-206ENST00000376724 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
TRIM40-206ENST00000376724 POLLQ9UGP5 575 aa15.24■□□□□ 0.03
TRIM40-206ENST00000376724 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 ZMYM6O95789 1325 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 SRGNP10124 158 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 SKOR2Q2VWA4 1001 aaPredicted RBP15.23■□□□□ 0.03
TRIM40-206ENST00000376724 CYB5R4Q7L1T6 521 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 DZIP1Q86YF9 867 aaKnown RBP15.23■□□□□ 0.03
TRIM40-206ENST00000376724 TDRD7Q8NHU6 1098 aaKnown RBP15.23■□□□□ 0.03
TRIM40-206ENST00000376724 CAMKK2Q96RR4 588 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 LMBRD1Q9NUN5 540 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIM40-206ENST00000376724 MTMR6Q9Y217 621 aa15.23■□□□□ 0.03
TRIM40-206ENST00000376724 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
TRIM40-206ENST00000376724 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 PPFIA3O75145 1194 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 F13A1P00488 732 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 NCLP19338 710 aaKnown RBP15.22■□□□□ 0.03
TRIM40-206ENST00000376724 PDE6BP35913 854 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
TRIM40-206ENST00000376724 RAB11FIP4Q86YS3 637 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms