RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 MYL10Q9BUA6 226 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 A0A0G2JS52 829 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 TPM3P06753 285 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 SF3A1Q15459 793 aaKnown RBP18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 MRPS27Q92552 414 aaKnown RBP18.17■□□□□ 0.5
TMEM50A-201ENST00000374358 B4E1Z4 1266 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 BIN1O00499 593 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 PHKBQ93100 1093 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 ITGB4P16144 1822 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 BECN2A8MW95 431 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 MYSM1Q5VVJ2 828 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 CCDC102BQ68D86 513 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 FILIP1Q7Z7B0 1213 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
TMEM50A-201ENST00000374358 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 MARCKSP29966 332 aaPredicted RBP18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 DPCR1Q3MIW9 517 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 GLIPR1L2Q4G1C9 344 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 FBXL16Q8N461 479 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 FBXO3Q9UK99 471 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 NEDD4P46934 1319 aa18.15■□□□□ 0.5
TMEM50A-201ENST00000374358 CTAGE5O15320 804 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 PDE8BO95263 885 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 CDC27P30260 824 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 ADALQ6DHV7 355 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 ISM2Q6H9L7 571 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 BCL2L12Q9HB09 334 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 MROH7-TTC4A0A0A0MT08 1334 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 DDX60Q8IY21 1712 aaKnown RBP18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 PDE6AP16499 860 aa18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
TMEM50A-201ENST00000374358 USP27XA6NNY8 438 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 SPTLC2O15270 562 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 MYH3P11055 1940 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 TRDNQ13061 729 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 TEX13AQ9BXU3 409 aaPredicted RBP18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
TMEM50A-201ENST00000374358 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 ANO10Q9NW15 660 aa18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 SLIT2O94813 1529 aa18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 WDHD1O75717 1129 aaPredicted RBP18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 CTDSPL2Q05D32 466 aa18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 TACC3Q9Y6A5 838 aa18.12■□□□□ 0.49
TMEM50A-201ENST00000374358 CHAF1AQ13111 956 aaPredicted RBP18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 CEP57L1Q8IYX8 460 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 ALG1Q9BT22 464 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 NUP98P52948 1817 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 SH2B2O14492 632 aaPredicted RBP18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 APOA5Q6Q788 366 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
TMEM50A-201ENST00000374358 LRP6O75581 1613 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 TCRBV5S4A2TA0A5A2 114 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 CAVIN2O95810 425 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 ANO1Q5XXA6 986 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 AIDAQ96BJ3 306 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 BCL9O00512 1426 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 PFKFB1P16118 471 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 AXDND1Q5T1B0 1012 aaPredicted RBP18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 VPS37DQ86XT2 251 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 MAGEB6Q8N7X4 407 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 KCNG4Q8TDN1 519 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 KIAA1468Q9P260 1216 aa18.1■□□□□ 0.49
TMEM50A-201ENST00000374358 A0A1W2PQ27 194 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 A0A1W2PQ64 194 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 A0A1W2PQD8 194 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 PRKAB2O43741 272 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 RANBP6O60518 1105 aaKnown RBP18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 PDE8AO60658 829 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 ZNF202O95125 648 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 MRFAP1L1Q96HT8 127 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 MAP7D2Q96T17 732 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 ARMT1Q9H993 441 aa18.09■□□□□ 0.49
TMEM50A-201ENST00000374358 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms