RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SEPT12Q8IYM1 358 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SPATA5Q8NB90 893 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 APPBP2Q92624 585 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
HERC4-202ENST00000373700 PDE8BO95263 885 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 CYP21A2P08686 494 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 HSPD1P10809 573 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 CYP19A1P11511 503 aaPredicted RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 SYKP43405 635 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 WTAPQ15007 396 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 TRMT1LQ7Z2T5 733 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 MRPS27Q92552 414 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 MAP4K1Q92918 833 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 CEMIPQ8WUJ3 1361 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 ARHGAP23Q9P227 1491 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 SPDYE4A6NLX3 237 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 E7EWF7 191 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SPTLC2O15270 562 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SSBP05455 408 aaKnown RBP eCLIP9.01□□□□□ -0.97
HERC4-202ENST00000373700 AFMP43652 599 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SCARF1Q14162 830 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 HAUS7Q99871 368 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 ZC3H12CQ9C0D7 883 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 MST1RQ04912 1400 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SOS2Q07890 1332 aaPredicted RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 RRP9O43818 475 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 FGAP02671 866 aa9□□□□□ -0.97
HERC4-202ENST00000373700 HIBADHP31937 336 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 CTCFLQ8NI51 663 aaPredicted RBP9□□□□□ -0.97
HERC4-202ENST00000373700 NYXQ9GZU5 481 aa9□□□□□ -0.97
HERC4-202ENST00000373700 ZHX3Q9H4I2 956 aa9□□□□□ -0.97
HERC4-202ENST00000373700 INCENPQ9NQS7 918 aa9□□□□□ -0.97
HERC4-202ENST00000373700 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
HERC4-202ENST00000373700 C3P01024 1663 aa9□□□□□ -0.97
HERC4-202ENST00000373700 NAP1L1P55209 391 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 EIF6P56537 245 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 CUL4AQ13619 759 aa9□□□□□ -0.97
HERC4-202ENST00000373700 OSBP2Q969R2 916 aa9□□□□□ -0.97
HERC4-202ENST00000373700 CCDC47Q96A33 483 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 KAZALD1Q96I82 304 aa9□□□□□ -0.97
HERC4-202ENST00000373700 ATP10DQ9P241 1426 aa9□□□□□ -0.97
HERC4-202ENST00000373700 KIF13AQ9H1H9 1805 aa9□□□□□ -0.97
HERC4-202ENST00000373700 CTAGE5O15320 804 aa9□□□□□ -0.97
HERC4-202ENST00000373700 NR1I2O75469 434 aa9□□□□□ -0.97
HERC4-202ENST00000373700 OFD1O75665 1012 aa9□□□□□ -0.97
HERC4-202ENST00000373700 FILIP1LQ4L180 1135 aa9□□□□□ -0.97
HERC4-202ENST00000373700 PPFIBP1Q86W92 1011 aa9□□□□□ -0.97
HERC4-202ENST00000373700 PDCL2Q8N4E4 241 aa9□□□□□ -0.97
HERC4-202ENST00000373700 PUS7LQ9H0K6 701 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 NOL7Q9UMY1 257 aaKnown RBP9□□□□□ -0.97
HERC4-202ENST00000373700 SLIT1O75093 1534 aa9□□□□□ -0.97
HERC4-202ENST00000373700 PRKAB2O43741 272 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 SKILP12757 684 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 PDE6AP16499 860 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 TXLNAP40222 546 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 WASF1Q92558 559 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 TM6SF1Q9BZW5 370 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 CCDC196A0A1B0GTZ2 297 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 NLRP5P59047 1200 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 HELLSQ9NRZ9 838 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 AFF2P51816 1311 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 M0R2C6 588 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 MAP7D2Q96T17 732 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 CRNKL1Q9BZJ0 848 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 CTDP1Q9Y5B0 961 aaPredicted RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 IFT172Q9UG01 1749 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 URI1O94763 535 aaPredicted RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 TOP1P11387 765 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 RTN1Q16799 776 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 IFIT1BQ5T764 474 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 NOC3LQ8WTT2 800 aaKnown RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 USP28Q96RU2 1077 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 RNF41Q9H4P4 317 aaPredicted RBP8.99□□□□□ -0.97
HERC4-202ENST00000373700 CBX8Q9HC52 389 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 TAF6LQ9Y6J9 622 aa8.99□□□□□ -0.97
HERC4-202ENST00000373700 RGS12O14924 1447 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 LDHBP07195 334 aaKnown RBP8.98□□□□□ -0.97
HERC4-202ENST00000373700 HSPA1LP34931 641 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 FOXO4P98177 505 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 CCDC96Q2M329 555 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 GTF3C6Q969F1 213 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 UIMC1Q96RL1 719 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 MAST3O60307 1309 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 CYP2D7A0A087X1C5 515 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 A0A0U1RQG5 324 aaPredicted RBP8.98□□□□□ -0.97
HERC4-202ENST00000373700 ITPK1Q13572 414 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 SKIDA1Q1XH10 827 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 GJB4Q9NTQ9 266 aa8.98□□□□□ -0.97
HERC4-202ENST00000373700 BAG3O95817 575 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms