RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 BCAMP50895 628 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 TRDNQ13061 729 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 RCOR1Q9UKL0 485 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 COL4A1P02462 1669 aa21.95■■□□□ 1.1
USP49-202ENST00000373010 IGHMBP2P38935 993 aaKnown RBP21.95■■□□□ 1.1
USP49-202ENST00000373010 PIP4K2BP78356 416 aa21.95■■□□□ 1.1
USP49-202ENST00000373010 DOCK2Q92608 1830 aa21.95■■□□□ 1.1
USP49-202ENST00000373010 INCENPQ9NQS7 918 aa21.95■■□□□ 1.1
USP49-202ENST00000373010 WDR19Q8NEZ3 1342 aa21.94■■□□□ 1.1
USP49-202ENST00000373010 ZNF500O60304 480 aaPredicted RBP21.94■■□□□ 1.1
USP49-202ENST00000373010 KCNQ4P56696 695 aa21.94■■□□□ 1.1
USP49-202ENST00000373010 ORC3Q9UBD5 711 aaPredicted RBP21.94■■□□□ 1.1
USP49-202ENST00000373010 B4E1Z4 1266 aa21.94■■□□□ 1.1
USP49-202ENST00000373010 MBD4O95243 580 aa21.94■■□□□ 1.1
USP49-202ENST00000373010 MAP3K12Q12852 859 aa21.94■■□□□ 1.1
USP49-202ENST00000373010 ZNF396Q96N95 335 aaPredicted RBP21.94■■□□□ 1.1
USP49-202ENST00000373010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.94■■□□□ 1.1
USP49-202ENST00000373010 CICQ96RK0 1608 aaPredicted RBP21.93■■□□□ 1.1
USP49-202ENST00000373010 LAMB2P55268 1798 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 RBM43Q6ZSC3 357 aaKnown RBP21.93■■□□□ 1.1
USP49-202ENST00000373010 ARMT1Q9H993 441 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 EPB41L4AQ9HCS5 686 aaPredicted RBP21.93■■□□□ 1.1
USP49-202ENST00000373010 GJB4Q9NTQ9 266 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 NEDD4P46934 1319 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 C4BP0C0L5 1744 aa21.93■■□□□ 1.1
USP49-202ENST00000373010 CPLX1O14810 134 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 DHX16O60231 1041 aaKnown RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 CHRNDQ07001 517 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 C8orf76Q96K31 380 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 SENP2Q9HC62 589 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 FAM98CQ17RN3 349 aaKnown RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 CCAR1Q8IX12 1150 aaKnown RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 LINC00116Q8NCU8 138 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 FAM200AQ8TCP9 573 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 GOLPH3LQ9H4A5 285 aa21.92■■□□□ 1.1
USP49-202ENST00000373010 ANGEL1Q9UNK9 670 aaKnown RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 COL5A3P25940 1745 aaPredicted RBP21.92■■□□□ 1.1
USP49-202ENST00000373010 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
USP49-202ENST00000373010 ANO6Q4KMQ2 910 aa21.91■■□□□ 1.1
USP49-202ENST00000373010 ZNF830Q96NB3 372 aaPredicted RBP21.91■■□□□ 1.1
USP49-202ENST00000373010 PATL2C9JE40 543 aaKnown RBP21.91■■□□□ 1.1
USP49-202ENST00000373010 SH2B2O14492 632 aaPredicted RBP21.91■■□□□ 1.1
USP49-202ENST00000373010 OFD1O75665 1012 aa21.91■■□□□ 1.1
USP49-202ENST00000373010 RXRAP19793 462 aa21.91■■□□□ 1.1
USP49-202ENST00000373010 SMIM5Q71RC9 77 aa21.91■■□□□ 1.1
USP49-202ENST00000373010 CTDSPL2Q05D32 466 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 LUZP1Q86V48 1076 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 IFNL3Q8IZI9 196 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
USP49-202ENST00000373010 TAF1P21675 1872 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 BCORQ6W2J9 1755 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 PRKAB2O43741 272 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 ALX1Q15699 326 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 ATL3Q6DD88 541 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 ZNF652Q9Y2D9 606 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 TACC3Q9Y6A5 838 aa21.9■■□□□ 1.1
USP49-202ENST00000373010 FBXO18Q8NFZ0 1043 aa21.89■■□□□ 1.1
USP49-202ENST00000373010 NAPBQ9H115 298 aa21.89■■□□□ 1.1
USP49-202ENST00000373010 POLR3DP05423 398 aaPredicted RBP21.89■■□□□ 1.09
USP49-202ENST00000373010 ME1P48163 572 aa21.89■■□□□ 1.09
USP49-202ENST00000373010 CBX8Q9HC52 389 aa21.89■■□□□ 1.09
USP49-202ENST00000373010 CHD4Q14839 1912 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 WTIPA6NIX2 430 aaPredicted RBP21.88■■□□□ 1.09
USP49-202ENST00000373010 SASS6Q6UVJ0 657 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 LCORLQ8N3X6 602 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 ZMYM6O95789 1325 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 GSG1L2A8MUP6 293 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 METAP2P50579 478 aaKnown RBP eCLIP21.88■■□□□ 1.09
USP49-202ENST00000373010 BICDL1Q6ZP65 573 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 PTF1AQ7RTS3 328 aa21.88■■□□□ 1.09
USP49-202ENST00000373010 APOA5Q6Q788 366 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 IGDCC4Q8TDY8 1250 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 AIFM3Q96NN9 605 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.87■■□□□ 1.09
USP49-202ENST00000373010 KIF28PB7ZC32 967 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 SNW1Q13573 536 aaKnown RBP21.87■■□□□ 1.09
USP49-202ENST00000373010 MIGA1Q8NAN2 632 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 CDC5LQ99459 802 aaKnown RBP21.87■■□□□ 1.09
USP49-202ENST00000373010 CLIC4Q9Y696 253 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 BCL9LQ86UU0 1499 aa21.87■■□□□ 1.09
USP49-202ENST00000373010 CDC27P30260 824 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 CLEC4GQ6UXB4 293 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.86■■□□□ 1.09
USP49-202ENST00000373010 CCDC73Q6ZRK6 1079 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 MICU3Q86XE3 530 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 FSIP1Q8NA03 581 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 MYL10Q9BUA6 226 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 TTC12Q9H892 705 aaPredicted RBP21.86■■□□□ 1.09
USP49-202ENST00000373010 RTEL1Q9NZ71 1219 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 LRP2BPQ9P2M1 347 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 TAOK2Q9UL54 1235 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 PCDHA7Q9UN72 937 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 NFXL1Q6ZNB6 911 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 TMEM87BQ96K49 555 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms