RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TNNC1P63316 161 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 PKP1Q13835 747 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 NLRP12P59046 1061 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 CCDC152Q4G0S7 254 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 GPT2Q8TD30 523 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 CCDC77Q9BR77 488 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 IQSEC3Q9UPP2 1182 aaPredicted RBP19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 CCDC6Q16204 474 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 SELENOSQ9BQE4 189 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 ZNF202O95125 648 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 KRT13P13646 458 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 IL13P35225 146 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 TSGA10Q9BZW7 698 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 MCM7P33993 719 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 TRIM14Q14142 442 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 PPP4R3AQ6IN85 833 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 TM6SF1Q9BZW5 370 aa19.35■□□□□ 0.69
PTP4A1-201ENST00000370651 STAMBPO95630 424 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 NAPAP54920 295 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 NAA16Q6N069 864 aaPredicted RBP19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 CABP5Q9NP86 173 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 HOMER2Q9NSB8 354 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 MLKLQ8NB16 471 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 DTHD1Q6ZMT9 781 aa19.34■□□□□ 0.69
PTP4A1-201ENST00000370651 PAIP2Q9BPZ3 127 aaKnown RBP19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 VPS16Q9H269 839 aa19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 IKBKGQ9Y6K9 419 aa19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 GBP6Q6ZN66 633 aa19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 TTC14Q96N46 770 aa19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.69
PTP4A1-201ENST00000370651 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 CYP26C1Q6V0L0 522 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 VWA3AA6NCI4 1184 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 B4GALNT4Q76KP1 1039 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 SCLT1Q96NL6 688 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 KIF24Q5T7B8 1368 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.68
PTP4A1-201ENST00000370651 KRT79Q5XKE5 535 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 DDX21Q9NR30 783 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 TLDC2A0PJX2 215 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 CUTAO60888 179 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 OTUD7BQ6GQQ9 843 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 NDUFAB1O14561 156 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 C6orf50Q9HD87 102 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 NFE2L3Q9Y4A8 694 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 JAK2O60674 1132 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 ABCC4O15439 1325 aa19.32■□□□□ 0.68
PTP4A1-201ENST00000370651 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 CCDC174Q6PII3 467 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 TBC1D8BQ0IIM8 1120 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 TNNI3KQ59H18 835 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 FPGT-TNNI3KV9GXZ4 949 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 MAGEB6P1A0A0J9YX57 407 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 CHRNA2Q15822 529 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 XPO4Q9C0E2 1151 aaKnown RBP19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 LRMPQ12912 555 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 MAP3K19Q56UN5 1328 aa19.31■□□□□ 0.68
PTP4A1-201ENST00000370651 ACTN2P35609 894 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 LRRC59Q96AG4 307 aaKnown RBP19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 GOLGA6CA6NDK9 693 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 EXOC5O00471 708 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 GOLGA6DP0CG33 693 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 GSTO1P78417 241 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 ME3Q16798 604 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 GRIPAP1Q4V328 841 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 GOLGA6AQ9NYA3 693 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 WDR62O43379 1518 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 TMTC1Q8IUR5 882 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 MAGEB6Q8N7X4 407 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 SAMD15Q9P1V8 674 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 ZNF174Q15697 407 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 ZNF215Q9UL58 517 aaPredicted RBP19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
PTP4A1-201ENST00000370651 TIMM10P62072 90 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 ANTXR1Q9H6X2 564 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 SMIM23A6NLE4 172 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 CEP63Q96MT8 703 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 PLIN2Q99541 437 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 PALD1Q9ULE6 856 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 ANGEL1Q9UNK9 670 aaKnown RBP19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 C8orf74Q6P047 294 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 A6NNZ2 444 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 HLA-DOAP06340 250 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 MTX1Q13505 466 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 TUBB8Q3ZCM7 444 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 MIGA1Q8NAN2 632 aa19.29■□□□□ 0.68
PTP4A1-201ENST00000370651 B4E1Z4 1266 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 INPP5BP32019 993 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms