RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
HIPK1-206ENST00000369559 TUBE1Q9UJT0 475 aa11.57□□□□□ -0.56
HIPK1-206ENST00000369559 UTYO14607 1347 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 KCNQ3O43525 872 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 CMA1P23946 247 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 PDIA3P30101 505 aaKnown RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 MCM6Q14566 821 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 TTC31Q49AM3 519 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 MSL3Q8N5Y2 521 aaKnown RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 TBX22Q9Y458 520 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 CHGBP05060 677 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 FDPSP14324 419 aaKnown RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 TEFQ10587 303 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 PTPN21Q16825 1174 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 BEND6Q5SZJ8 279 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 TOGARAM2Q6ZUX3 1019 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 CCDC12Q8WUD4 166 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 AXDND1Q5T1B0 1012 aaPredicted RBP11.56□□□□□ -0.56
HIPK1-206ENST00000369559 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
HIPK1-206ENST00000369559 USP5P45974 858 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 TBX2Q13207 712 aaPredicted RBP11.55□□□□□ -0.56
HIPK1-206ENST00000369559 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 SRGAP1Q7Z6B7 1085 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 KLHDC4Q8TBB5 520 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 LGR6Q9HBX8 967 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 BRAPQ7Z569 592 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 ANKZF1Q9H8Y5 726 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 INTS13Q9NVM9 706 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
HIPK1-206ENST00000369559 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
HIPK1-206ENST00000369559 EIF3CLB5ME19 914 aaKnown RBP11.54□□□□□ -0.56
HIPK1-206ENST00000369559 ERLIN1O75477 346 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 PDILTQ8N807 584 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
HIPK1-206ENST00000369559 C8orf76Q96K31 380 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 EIF3CQ99613 913 aaKnown RBP11.54□□□□□ -0.56
HIPK1-206ENST00000369559 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 FANCLQ9NW38 375 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
HIPK1-206ENST00000369559 RAB21Q9UL25 225 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 MROH7-TTC4A0A0A0MT08 1334 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 CUTAO60888 179 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 SYKP43405 635 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 PROSER3Q2NL68 480 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 GUCY2CP25092 1073 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
HIPK1-206ENST00000369559 SH3TC1Q8TE82 1336 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 KARSQ15046 597 aaKnown RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 USHBP1Q8N6Y0 703 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 MSANTD4Q8NCY6 345 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 E7EWF7 191 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 CEP112Q8N8E3 955 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 DIP2AQ14689 1571 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 ADKP55263 362 aaKnown RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 CORO7P57737 925 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 TNNI3KQ59H18 835 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 SPECC1LQ69YQ0 1117 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 PAXIP1Q6ZW49 1069 aaPredicted RBP11.53□□□□□ -0.56
HIPK1-206ENST00000369559 PNKPQ96T60 521 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 DESI2Q9BSY9 194 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 FPGT-TNNI3KV9GXZ4 949 aa11.53□□□□□ -0.56
HIPK1-206ENST00000369559 NLRP6P59044 892 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 PNOCQ13519 176 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 DDX46Q7L014 1031 aaKnown RBP11.52□□□□□ -0.57
HIPK1-206ENST00000369559 HAUS7Q99871 368 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.57
HIPK1-206ENST00000369559 AKAP2Q9Y2D5 859 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 KCNA6P17658 529 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 TUBB4BP68371 445 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
HIPK1-206ENST00000369559 FAM71BQ8TC56 605 aa11.52□□□□□ -0.57
HIPK1-206ENST00000369559 MRPL44Q9H9J2 332 aaKnown RBP11.52□□□□□ -0.57
HIPK1-206ENST00000369559 ABCB6Q9NP58 842 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms