RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 SPTY2D1Q68D10 685 aaPredicted RBP23.18■■□□□ 1.3
CHTOP-204ENST00000368694 ARMT1Q9H993 441 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 CYP46A1Q9Y6A2 500 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
CHTOP-204ENST00000368694 RPAP1Q9BWH6 1393 aaPredicted RBP23.17■■□□□ 1.3
CHTOP-204ENST00000368694 MECOMQ03112 1051 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 TSGA10IPQ3SY00 556 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 NOL8Q76FK4 1167 aaKnown RBP23.17■■□□□ 1.3
CHTOP-204ENST00000368694 ADGRA1Q86SQ6 560 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
CHTOP-204ENST00000368694 EYA3Q99504 573 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 SALL1Q9NSC2 1324 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 A0A0G2JLW4 131 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 FGAP02671 866 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 MCM2P49736 904 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 IL27Q8NEV9 243 aa23.17■■□□□ 1.3
CHTOP-204ENST00000368694 NSUN4Q96CB9 384 aaKnown RBP23.17■■□□□ 1.3
CHTOP-204ENST00000368694 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
CHTOP-204ENST00000368694 LDHBP07195 334 aaKnown RBP23.16■■□□□ 1.3
CHTOP-204ENST00000368694 TTLL5Q6EMB2 1281 aa23.16■■□□□ 1.3
CHTOP-204ENST00000368694 RUFY3Q7L099 469 aa23.16■■□□□ 1.3
CHTOP-204ENST00000368694 LCORLQ8N3X6 602 aa23.16■■□□□ 1.3
CHTOP-204ENST00000368694 COA1Q9GZY4 146 aa23.16■■□□□ 1.3
CHTOP-204ENST00000368694 ZSWIM6Q9HCJ5 1215 aa23.16■■□□□ 1.3
CHTOP-204ENST00000368694 G3V3G9 751 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 IMMTQ16891 758 aaKnown RBP23.15■■□□□ 1.3
CHTOP-204ENST00000368694 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 TTLL6Q8N841 843 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 LAMA4Q16363 1823 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 CHD4Q14839 1912 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 MAGEB6P1A0A0J9YX57 407 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 DPEP1P16444 411 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 ZNF384Q8TF68 577 aa23.15■■□□□ 1.3
CHTOP-204ENST00000368694 GNAT2P19087 354 aa23.14■■□□□ 1.29
CHTOP-204ENST00000368694 KIAA1551Q9HCM1 1747 aa23.14■■□□□ 1.29
CHTOP-204ENST00000368694 C21orf2O43822 256 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 HAND2P61296 217 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 TTC14Q96N46 770 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 PDRG1Q9NUG6 133 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 SLC4A4Q9Y6R1 1079 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 PATL2C9JE40 543 aaKnown RBP23.13■■□□□ 1.29
CHTOP-204ENST00000368694 DOK7Q18PE1 504 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 FBXW7Q969H0 707 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 NEK1Q96PY6 1258 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
CHTOP-204ENST00000368694 PPP1R1BQ9UD71 204 aaPredicted RBP23.13■■□□□ 1.29
CHTOP-204ENST00000368694 CC2D2BQ6DHV5 1058 aa23.12■■□□□ 1.29
CHTOP-204ENST00000368694 ZNF213O14771 459 aa23.12■■□□□ 1.29
CHTOP-204ENST00000368694 AK2P54819 239 aa23.12■■□□□ 1.29
CHTOP-204ENST00000368694 MFSD14BQ5SR56 506 aa23.12■■□□□ 1.29
CHTOP-204ENST00000368694 NAPBQ9H115 298 aa23.12■■□□□ 1.29
CHTOP-204ENST00000368694 KCNA3P22001 575 aa23.11■■□□□ 1.29
CHTOP-204ENST00000368694 GTF2IP78347 998 aa23.11■■□□□ 1.29
CHTOP-204ENST00000368694 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
CHTOP-204ENST00000368694 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
CHTOP-204ENST00000368694 NACAP1Q9BZK3 213 aa23.11■■□□□ 1.29
CHTOP-204ENST00000368694 MYH2Q9UKX2 1941 aa23.11■■□□□ 1.29
CHTOP-204ENST00000368694 E7EWF7 191 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 PRKAB2O43741 272 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 RPS6KB1P23443 525 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 IFNL3Q8IZI9 196 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 TMX3Q96JJ7 454 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 RIOK1Q9BRS2 568 aaKnown RBP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 TGFB2P61812 414 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 DYNLL1P63167 89 aaKnown RBP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 COL9A3Q14050 684 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 GRIK5Q16478 980 aa23.1■■□□□ 1.29
CHTOP-204ENST00000368694 RTFDC1Q9BY42 306 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 EPB41L4AQ9HCS5 686 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 AATFQ9NY61 560 aaKnown RBP eCLIP23.1■■□□□ 1.29
CHTOP-204ENST00000368694 GSG1L2A8MUP6 293 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 IGSF3O75054 1194 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 TDO2P48775 406 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 GSTO1P78417 241 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 TCEANC2Q96MN5 208 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 DBNDD1Q9H9R9 158 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 FAM205AQ6ZU69 1335 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 ALX1Q15699 326 aa23.09■■□□□ 1.29
CHTOP-204ENST00000368694 ZMYM6O95789 1325 aa23.08■■□□□ 1.29
CHTOP-204ENST00000368694 SNED1Q8TER0 1413 aa23.08■■□□□ 1.29
CHTOP-204ENST00000368694 HMGB1P09429 215 aaKnown RBP23.08■■□□□ 1.29
CHTOP-204ENST00000368694 CCDC93Q567U6 631 aa23.08■■□□□ 1.29
CHTOP-204ENST00000368694 SUPT20HQ8NEM7 779 aa23.08■■□□□ 1.29
CHTOP-204ENST00000368694 SDR42E1Q8WUS8 393 aa23.08■■□□□ 1.29
CHTOP-204ENST00000368694 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
CHTOP-204ENST00000368694 DIXDC1Q155Q3 683 aa23.07■■□□□ 1.28
CHTOP-204ENST00000368694 PIM2Q9P1W9 311 aa23.07■■□□□ 1.28
CHTOP-204ENST00000368694 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
CHTOP-204ENST00000368694 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
CHTOP-204ENST00000368694 AOC3Q16853 763 aa23.06■■□□□ 1.28
CHTOP-204ENST00000368694 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
CHTOP-204ENST00000368694 PODNQ7Z5L7 613 aa23.06■■□□□ 1.28
CHTOP-204ENST00000368694 RTKN2Q8IZC4 609 aa23.05■■□□□ 1.28
CHTOP-204ENST00000368694 SGIP1Q9BQI5 828 aa23.05■■□□□ 1.28
CHTOP-204ENST00000368694 NOL10Q9BSC4 688 aaKnown RBP23.05■■□□□ 1.28
CHTOP-204ENST00000368694 BRCA1P38398 1863 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms