RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 LPIN2Q92539 896 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 MCM3P25205 808 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 CEP85Q6P2H3 762 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 KIF18AQ8NI77 898 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 PLIN2Q99541 437 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 CCDC169A6NNP5 214 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 SPAG1Q07617 926 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 BIRC3Q13489 604 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 MAPKAPK5Q8IW41 473 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 FNBP1Q96RU3 617 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 TRMT1Q9NXH9 659 aaKnown RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 PRDM1O75626 825 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 SMTNP53814 917 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 GSDMDP57764 484 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 HSP90AA4PQ58FG1 418 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 CTAGE1Q96RT6 745 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 AS3MTQ9HBK9 375 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 TTF2Q9UNY4 1162 aaKnown RBP11.97□□□□□ -0.49
CACNA1S-201ENST00000362061 POLR3AO14802 1390 aaPredicted RBP11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 FERP16591 822 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 SLC8A3P57103 927 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 UBE2HP62256 183 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 DHX32Q7L7V1 743 aaKnown RBP11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 IFT74Q96LB3 600 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 DKC1O60832 514 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 ARID5AQ03989 594 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 CNGA1P29973 690 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1S-201ENST00000362061 SMC1AQ14683 1233 aaKnown RBP11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 FAM47CQ5HY64 1035 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 TEKT1Q969V4 418 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 INCENPQ9NQS7 918 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 GOLGA6L10A0A0M3HER8 536 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 B4E1Z4 1266 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 TNNI3KQ59H18 835 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 CREB3L3Q68CJ9 461 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 USP25Q9UHP3 1055 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.5
CACNA1S-201ENST00000362061 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 MROH5Q6ZUA9 1318 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 MFSD14BQ5SR56 506 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 HOXB7P09629 217 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 DCAF15Q66K64 600 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 TMCO3Q6UWJ1 677 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 PPP1R14CQ8TAE6 165 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 DDX39AO00148 427 aaKnown RBP11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 SPTLC2O15270 562 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 USH1GQ495M9 461 aa11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
CACNA1S-201ENST00000362061 CCT6AP40227 531 aaKnown RBP11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 PLCB3Q01970 1234 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 STRN3Q13033 797 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 DBNDD2Q9BQY9 259 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 GLT8D2Q9H1C3 349 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 CYLC1P35663 651 aaPredicted RBP11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 ARHGEF6Q15052 776 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 G2E3Q7L622 706 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 DNM2P50570 870 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 TMEM94Q12767 1356 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 UBASH3AP57075 661 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 GADL1Q6ZQY3 521 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 UGGT2Q9NYU1 1516 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 NEMFO60524 1076 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 CFBP00751 764 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 RPL13P26373 211 aaKnown RBP11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 WDR44Q5JSH3 913 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 RNF34Q969K3 372 aa11.94□□□□□ -0.5
CACNA1S-201ENST00000362061 CCDC66A2RUB6 948 aa11.93□□□□□ -0.5
CACNA1S-201ENST00000362061 PRPHP41219 470 aa11.93□□□□□ -0.5
CACNA1S-201ENST00000362061 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
CACNA1S-201ENST00000362061 ZMYND15Q9H091 742 aa11.93□□□□□ -0.5
CACNA1S-201ENST00000362061 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms