RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 BCL9LQ86UU0 1499 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 UVSSAQ2YD98 709 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 BICD2Q8TD16 824 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 NOL7Q9UMY1 257 aaKnown RBP23.54■■□□□ 1.36
CHD1L-201ENST00000361293 ZNF652Q9Y2D9 606 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 NEDD4P46934 1319 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 CKAP2LQ8IYA6 745 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 USP28Q96RU2 1077 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 ARMT1Q9H993 441 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 SENP2Q9HC62 589 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 CFAP45Q9UL16 551 aa23.54■■□□□ 1.36
CHD1L-201ENST00000361293 IQSEC3Q9UPP2 1182 aaPredicted RBP23.54■■□□□ 1.36
CHD1L-201ENST00000361293 B4E1Z4 1266 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 TOM1O60784 492 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 MAP3K12Q12852 859 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 GJB4Q9NTQ9 266 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 MSNP26038 577 aaKnown RBP23.53■■□□□ 1.36
CHD1L-201ENST00000361293 TRDNQ13061 729 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 MAP3K11Q16584 847 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 BICDL1Q6ZP65 573 aa23.53■■□□□ 1.36
CHD1L-201ENST00000361293 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 TNMDQ9H2S6 317 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 TACC3Q9Y6A5 838 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 C4AP0C0L4 1744 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 C4BP0C0L5 1744 aa23.52■■□□□ 1.36
CHD1L-201ENST00000361293 PRKAB2O43741 272 aa23.51■■□□□ 1.35
CHD1L-201ENST00000361293 CCDC192P0DO97 292 aa23.51■■□□□ 1.35
CHD1L-201ENST00000361293 CLEC4GQ6UXB4 293 aa23.51■■□□□ 1.35
CHD1L-201ENST00000361293 ANGEL1Q9UNK9 670 aaKnown RBP23.51■■□□□ 1.35
CHD1L-201ENST00000361293 RXRAP19793 462 aa23.51■■□□□ 1.35
CHD1L-201ENST00000361293 IFNL3Q8IZI9 196 aa23.51■■□□□ 1.35
CHD1L-201ENST00000361293 DDX19AQ9NUU7 478 aaKnown RBP23.51■■□□□ 1.35
CHD1L-201ENST00000361293 CTDSPL2Q05D32 466 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 MPNDQ8N594 471 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 CLSTN2Q9H4D0 955 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 ORC3Q9UBD5 711 aaPredicted RBP23.5■■□□□ 1.35
CHD1L-201ENST00000361293 RCOR1Q9UKL0 485 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 PATL2C9JE40 543 aaKnown RBP23.5■■□□□ 1.35
CHD1L-201ENST00000361293 SH2B2O14492 632 aaPredicted RBP23.5■■□□□ 1.35
CHD1L-201ENST00000361293 AP5Z1O43299 807 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 LCORLQ8N3X6 602 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 BCL2L12Q9HB09 334 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 MRVI1Q9Y6F6 885 aa23.5■■□□□ 1.35
CHD1L-201ENST00000361293 GSG1L2A8MUP6 293 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 ADCY5O95622 1261 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 TYRO3Q06418 890 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 VPS72Q15906 364 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 CDC5LQ99459 802 aaKnown RBP23.49■■□□□ 1.35
CHD1L-201ENST00000361293 CCDC39Q9UFE4 941 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 A0A1B0GUL6 1792 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 ALX1Q15699 326 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 FAM182BQ5T319 152 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 NAPBQ9H115 298 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 ZKSCAN5Q9Y2L8 839 aa23.49■■□□□ 1.35
CHD1L-201ENST00000361293 CPLX1O14810 134 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 DHX16O60231 1041 aaKnown RBP23.48■■□□□ 1.35
CHD1L-201ENST00000361293 GYG1P46976 350 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 RBM43Q6ZSC3 357 aaKnown RBP23.48■■□□□ 1.35
CHD1L-201ENST00000361293 MIGA1Q8NAN2 632 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 CHMP4CQ96CF2 233 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 C8orf76Q96K31 380 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 KDM4AO75164 1064 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 GOLPH3LQ9H4A5 285 aa23.48■■□□□ 1.35
CHD1L-201ENST00000361293 CHD4Q14839 1912 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 ADGRA1Q86SQ6 560 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 COL1A1P02452 1464 aaPredicted RBP23.47■■□□□ 1.35
CHD1L-201ENST00000361293 ZMYM6O95789 1325 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 APOA5Q6Q788 366 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 ANKRD18AQ8IVF6 992 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 FBXO18Q8NFZ0 1043 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 IGDCC4Q8TDY8 1250 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 AIFM3Q96NN9 605 aa23.47■■□□□ 1.35
CHD1L-201ENST00000361293 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
CHD1L-201ENST00000361293 CNTNAP4Q9C0A0 1308 aa23.46■■□□□ 1.35
CHD1L-201ENST00000361293 SCN7AQ01118 1682 aa23.46■■□□□ 1.35
CHD1L-201ENST00000361293 PTMAP06454 111 aaKnown RBP23.46■■□□□ 1.35
CHD1L-201ENST00000361293 SF3B3Q15393 1217 aaKnown RBP23.46■■□□□ 1.35
CHD1L-201ENST00000361293 LRP2BPQ9P2M1 347 aa23.46■■□□□ 1.35
CHD1L-201ENST00000361293 POLR3DP05423 398 aaPredicted RBP23.45■■□□□ 1.35
CHD1L-201ENST00000361293 CDC27P30260 824 aa23.45■■□□□ 1.35
CHD1L-201ENST00000361293 PLCB2Q00722 1185 aa23.45■■□□□ 1.35
CHD1L-201ENST00000361293 MICU3Q86XE3 530 aa23.45■■□□□ 1.35
CHD1L-201ENST00000361293 CCDC144CPQ8IYA2 1237 aa23.45■■□□□ 1.35
CHD1L-201ENST00000361293 CELF1Q92879 486 aaKnown RBP23.45■■□□□ 1.35
CHD1L-201ENST00000361293 ZNF396Q96N95 335 aaPredicted RBP23.45■■□□□ 1.35
CHD1L-201ENST00000361293 MYL10Q9BUA6 226 aa23.45■■□□□ 1.35
CHD1L-201ENST00000361293 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
CHD1L-201ENST00000361293 AMIGO3Q86WK7 504 aa23.45■■□□□ 1.34
CHD1L-201ENST00000361293 LY9Q9HBG7 655 aa23.45■■□□□ 1.34
CHD1L-201ENST00000361293 ZSWIM5Q9P217 1185 aa23.45■■□□□ 1.34
CHD1L-201ENST00000361293 SLC4A4Q9Y6R1 1079 aa23.45■■□□□ 1.34
CHD1L-201ENST00000361293 KIF28PB7ZC32 967 aa23.44■■□□□ 1.34
CHD1L-201ENST00000361293 METAP2P50579 478 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHD1L-201ENST00000361293 CCAR1Q8IX12 1150 aaKnown RBP23.44■■□□□ 1.34
CHD1L-201ENST00000361293 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms