RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 GNPATO15228 680 aa16.12■□□□□ 0.17
PCMTD1-201ENST00000360540 ERLIN1O75477 346 aa16.12■□□□□ 0.17
PCMTD1-201ENST00000360540 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
PCMTD1-201ENST00000360540 SNAP23O00161 211 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 STAT6P42226 847 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 SPA17Q15506 151 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 POLR2DO15514 142 aaKnown RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 KRT40Q6A162 431 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 GPHNQ9NQX3 736 aaPredicted RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 GREM2Q9H772 168 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 RNF17Q9BXT8 1623 aaKnown RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 PDE8AO60658 829 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 ZNF202O95125 648 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 LDHCP07864 332 aa16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 EIF6P56537 245 aaKnown RBP16.11■□□□□ 0.17
PCMTD1-201ENST00000360540 SYCP1Q15431 976 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 AATFQ9NY61 560 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 MYO1BO43795 1136 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 TRIM21P19474 475 aaKnown RBP16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 CCT6AP40227 531 aaKnown RBP16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 JAKMIP3Q5VZ66 844 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 BRAPQ7Z569 592 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 YEATS4O95619 227 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 LEKR1Q6ZMV7 388 aa16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCMTD1-201ENST00000360540 ERBB3P21860 1342 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 NAPAP54920 295 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 SCRN1Q12765 414 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 ZNF397Q8NF99 534 aaPredicted RBP16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 KIF2CQ99661 725 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 COPRSQ9NQ92 184 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 HAUS7Q99871 368 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 PHKA1P46020 1223 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 BCAMP50895 628 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 FAM98CQ17RN3 349 aaKnown RBP16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 KCNH3Q9ULD8 1083 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
PCMTD1-201ENST00000360540 CCDC66A2RUB6 948 aa16.08■□□□□ 0.17
PCMTD1-201ENST00000360540 GYG1P46976 350 aa16.08■□□□□ 0.17
PCMTD1-201ENST00000360540 TMEM266Q2M3C6 531 aa16.08■□□□□ 0.17
PCMTD1-201ENST00000360540 ZMYND15Q9H091 742 aa16.08■□□□□ 0.17
PCMTD1-201ENST00000360540 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 ZNF75DP51815 510 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 PTPN12Q05209 780 aaKnown RBP16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 GJB4Q9NTQ9 266 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 PAXBP1Q9Y5B6 917 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 H0YHG0 523 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CHGBP05060 677 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 ASIC1P78348 528 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 E9PCH4 1651 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CUL4AQ13619 759 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 LUC7LQ9NQ29 371 aaKnown RBP16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 CGNQ9P2M7 1197 aaKnown RBP16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
PCMTD1-201ENST00000360540 UNC13BO14795 1591 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 RGS12O14924 1447 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 MCM6Q14566 821 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.163e-8■■■□□ 18.7
PCMTD1-201ENST00000360540 ARID5AQ03989 594 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 LPIN2Q92539 896 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 TSPYL1Q9H0U9 437 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 MYL5Q02045 173 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 JADE2Q9NQC1 790 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms