RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SARNPP82979 210 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 FLIIQ13045 1269 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 KCNV1Q6PIU1 500 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 L2HGDHQ9H9P8 463 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 TRMT1Q9NXH9 659 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 H3BQF6 201 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 CDC45O75419 566 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 IVLP07476 585 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 CASTP20810 708 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 CT47B1P0C2W7 299 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 TM4SF1P30408 202 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 MNAT1P51948 309 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 CCDC93Q567U6 631 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 LUZP1Q86V48 1076 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 DRC7Q8IY82 874 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ZNF496Q96IT1 587 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 DDX60Q8IY21 1712 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 NUP98P52948 1817 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ST18O60284 1047 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 SMC2O95347 1197 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 GSPT1P15170 499 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 PAX7P23759 505 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 CABP4P57796 275 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ANKRD45Q5TZF3 282 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 TMX3Q96JJ7 454 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 CCDC171Q6TFL3 1326 aa10.82□□□□□ -0.68
SMARCAL1-202ENST00000358207 C21orf2O43822 256 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 GYS1P13807 737 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 CNPY2Q9Y2B0 182 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 PI4KAP2A4QPH2 592 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 HNRNPH1P31943 449 aaKnown RBP10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 CPLX2Q6PUV4 134 aaKnown RBP10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 PI4KAP1Q8N8J0 262 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 USP16Q9Y5T5 823 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 NEBLO76041 1014 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 ZNF75DP51815 510 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 TATDN2Q93075 761 aa10.81□□□□□ -0.68
SMARCAL1-202ENST00000358207 TPM1P09493 284 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 KIF2AO00139 706 aaPredicted RBP10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 TBC1D8BQ0IIM8 1120 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 SIRT2Q8IXJ6 389 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 API5Q9BZZ5 524 aaKnown RBP10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 PLEKHA4Q9H4M7 779 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 LTBP3Q9NS15 1303 aa10.8□□□□□ -0.68
SMARCAL1-202ENST00000358207 ZNF790Q6PG37 636 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 LRRC8AQ8IWT6 810 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 EFCAB13Q8IY85 973 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 TTC5Q8N0Z6 440 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 HEG1Q9ULI3 1381 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 ATP8B1O43520 1251 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 KCNA3P22001 575 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 KCNQ4P56696 695 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 CWF19L2Q2TBE0 894 aaKnown RBP10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 TRAPPC3LQ5T215 181 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 LRRC31Q6UY01 552 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 FILIP1Q7Z7B0 1213 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
SMARCAL1-202ENST00000358207 CAND2O75155 1236 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 COL15A1P39059 1388 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 FAM200AQ8TCP9 573 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 SNED1Q8TER0 1413 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 RPAP1Q9BWH6 1393 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 A0A087WZG4 1122 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 CYP19A1P11511 503 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 CALRP27797 417 aaKnown RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 TSHZ3Q63HK5 1081 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 C16orf71Q8IYS4 520 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 TRIM5Q9C035 493 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 A0A087WUV0 522 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 CUL4AQ13619 759 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 FBXW10Q5XX13 1052 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 SRCIN1Q9C0H9 1055 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms