RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
PHTF1-201ENST00000357783 CPLX1O14810 134 aa18.54■□□□□ 0.56
PHTF1-201ENST00000357783 RBM43Q6ZSC3 357 aaKnown RBP18.54■□□□□ 0.56
PHTF1-201ENST00000357783 LUZP1Q86V48 1076 aa18.54■□□□□ 0.56
PHTF1-201ENST00000357783 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
PHTF1-201ENST00000357783 CCAR1Q8IX12 1150 aaKnown RBP18.54■□□□□ 0.56
PHTF1-201ENST00000357783 C8orf76Q96K31 380 aa18.54■□□□□ 0.56
PHTF1-201ENST00000357783 ORC3Q9UBD5 711 aaPredicted RBP18.54■□□□□ 0.56
PHTF1-201ENST00000357783 CYB5R4Q7L1T6 521 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 PARP10Q53GL7 1025 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 SASS6Q6UVJ0 657 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
PHTF1-201ENST00000357783 GOLPH3LQ9H4A5 285 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 TTC12Q9H892 705 aaPredicted RBP18.53■□□□□ 0.56
PHTF1-201ENST00000357783 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
PHTF1-201ENST00000357783 CCDC152Q4G0S7 254 aa18.52■□□□□ 0.56
PHTF1-201ENST00000357783 CBX8Q9HC52 389 aa18.52■□□□□ 0.56
PHTF1-201ENST00000357783 GJB4Q9NTQ9 266 aa18.52■□□□□ 0.56
PHTF1-201ENST00000357783 B4E1Z4 1266 aa18.52■□□□□ 0.56
PHTF1-201ENST00000357783 ME1P48163 572 aa18.52■□□□□ 0.56
PHTF1-201ENST00000357783 MBD4O95243 580 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 NTSR2O95665 410 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 IGHMBP2P38935 993 aaKnown RBP18.51■□□□□ 0.55
PHTF1-201ENST00000357783 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 ATL3Q6DD88 541 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 ANGEL1Q9UNK9 670 aaKnown RBP18.51■□□□□ 0.55
PHTF1-201ENST00000357783 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
PHTF1-201ENST00000357783 MAP3K12Q12852 859 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 INCENPQ9NQS7 918 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 RREB1Q92766 1687 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 SPATA31A5Q5VU36 1347 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 SPATA31A7Q8IWB4 1347 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 DOCK2Q92608 1830 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 KCNQ2O43526 872 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 RXRAP19793 462 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 BCAMP50895 628 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
PHTF1-201ENST00000357783 NEDD4P46934 1319 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 SH2B2O14492 632 aaPredicted RBP18.5■□□□□ 0.55
PHTF1-201ENST00000357783 POLR3DP05423 398 aaPredicted RBP18.5■□□□□ 0.55
PHTF1-201ENST00000357783 DNAJC25Q9H1X3 360 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 ARMT1Q9H993 441 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 R3HCC1Q9Y3T6 440 aaKnown RBP18.5■□□□□ 0.55
PHTF1-201ENST00000357783 FBXO18Q8NFZ0 1043 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
PHTF1-201ENST00000357783 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
PHTF1-201ENST00000357783 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
PHTF1-201ENST00000357783 NAPBQ9H115 298 aa18.49■□□□□ 0.55
PHTF1-201ENST00000357783 CHD4Q14839 1912 aa18.49■□□□□ 0.55
PHTF1-201ENST00000357783 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
PHTF1-201ENST00000357783 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.55
PHTF1-201ENST00000357783 PATL2C9JE40 543 aaKnown RBP18.48■□□□□ 0.55
PHTF1-201ENST00000357783 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 SNW1Q13573 536 aaKnown RBP18.48■□□□□ 0.55
PHTF1-201ENST00000357783 IFNL3Q8IZI9 196 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 LAMB2P55268 1798 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 COL4A1P02462 1669 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 ZNF165P49910 485 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 CHRNDQ07001 517 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 MICU3Q86XE3 530 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 CCDC144CPQ8IYA2 1237 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 RTEL1Q9NZ71 1219 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 CLIC4Q9Y696 253 aa18.48■□□□□ 0.55
PHTF1-201ENST00000357783 KINO60870 393 aaKnown RBP18.47■□□□□ 0.55
PHTF1-201ENST00000357783 PCDHA7Q9UN72 937 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 PRKAB2O43741 272 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 ALX1Q15699 326 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 AIFM3Q96NN9 605 aa18.47■□□□□ 0.55
PHTF1-201ENST00000357783 IQSEC3Q9UPP2 1182 aaPredicted RBP18.47■□□□□ 0.55
PHTF1-201ENST00000357783 STK38Q15208 465 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 C17orf53Q8N3J3 647 aaPredicted RBP18.46■□□□□ 0.55
PHTF1-201ENST00000357783 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 TPM2P07951 284 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 KCNQ4P56696 695 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 SF3A1Q15459 793 aaKnown RBP18.46■□□□□ 0.55
PHTF1-201ENST00000357783 TMEM67Q5HYA8 995 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 LCORLQ8N3X6 602 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 ENGASEQ8NFI3 743 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
PHTF1-201ENST00000357783 CTAGE5O15320 804 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 CDC27P30260 824 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 MYSM1Q5VVJ2 828 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 MIGA1Q8NAN2 632 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 LINC00301Q8NCQ3 95 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
PHTF1-201ENST00000357783 PHKBQ93100 1093 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
PHTF1-201ENST00000357783 TAF1P21675 1872 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms