RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 HOXB7P09629 217 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 DNAI2Q9GZS0 605 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 OGFRQ9NZT2 677 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 LIG1P18858 919 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 FAM160A1Q05DH4 1040 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 TNNI3KQ59H18 835 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 NCOA5Q9HCD5 579 aaKnown RBP14.09□□□□□ -0.15
COLCA1-201ENST00000355430 IQSEC3Q9UPP2 1182 aaPredicted RBP14.09□□□□□ -0.15
COLCA1-201ENST00000355430 FPGT-TNNI3KV9GXZ4 949 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 LDHBP07195 334 aaKnown RBP14.09□□□□□ -0.15
COLCA1-201ENST00000355430 IL17REQ8NFR9 667 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 ZBTB43O43298 467 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
COLCA1-201ENST00000355430 ARHGAP27Q6ZUM4 889 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 LSG1Q9H089 658 aaKnown RBP14.09□□□□□ -0.15
COLCA1-201ENST00000355430 ZNF408Q9H9D4 720 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 PODXL2Q9NZ53 605 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 STAP2Q9UGK3 403 aa14.09□□□□□ -0.15
COLCA1-201ENST00000355430 SSBP05455 408 aaKnown RBP eCLIP14.08□□□□□ -0.15
COLCA1-201ENST00000355430 RASEFQ8IZ41 740 aa14.08□□□□□ -0.15
COLCA1-201ENST00000355430 BCL2L12Q9HB09 334 aa14.08□□□□□ -0.15
COLCA1-201ENST00000355430 GLI2P10070 1586 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 DBNDD2Q9BQY9 259 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 TPCN1Q9ULQ1 816 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 PDE8AO60658 829 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 CDR1P51861 262 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 CUL4AQ13619 759 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 MFSD6Q6ZSS7 791 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 IQCEQ6IPM2 695 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
COLCA1-201ENST00000355430 KCNQ3O43525 872 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 ABCC3O15438 1527 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 RNF17Q9BXT8 1623 aaKnown RBP14.07□□□□□ -0.16
COLCA1-201ENST00000355430 SYCP1Q15431 976 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 CNKSR1Q969H4 720 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 JCADQ9P266 1359 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 H7C1D1 291 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 RXRAP19793 462 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 KIF2CQ99661 725 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 BIN2Q9UBW5 565 aaPredicted RBP14.07□□□□□ -0.16
COLCA1-201ENST00000355430 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 EDC3Q96F86 508 aaKnown RBP14.07□□□□□ -0.16
COLCA1-201ENST00000355430 DENND2AQ9ULE3 1009 aa14.07□□□□□ -0.16
COLCA1-201ENST00000355430 AFMP43652 599 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 HELLSQ9NRZ9 838 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 A0A0D9SFI3 127 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 PHKG2P15735 406 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 TCIRG1Q13488 830 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 ADCK5Q3MIX3 580 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 KANK3Q6NY19 840 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 C2CD5Q86YS7 1000 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 TSPYL1Q9H0U9 437 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 ROBO2Q9HCK4 1378 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
COLCA1-201ENST00000355430 YEATS4O95619 227 aa14.06□□□□□ -0.16
COLCA1-201ENST00000355430 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
COLCA1-201ENST00000355430 LMAN1P49257 510 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 NLRP5P59047 1200 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 OTUD7BQ6GQQ9 843 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 SH2D4AQ9H788 454 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 TIMM10P62072 90 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 PICK1Q9NRD5 415 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 PYCARDQ9ULZ3 195 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 NR1I2O75469 434 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 LRMPQ12912 555 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 ATL3Q6DD88 541 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
COLCA1-201ENST00000355430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.16
COLCA1-201ENST00000355430 ARHGAP31Q2M1Z3 1444 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 METTL22Q9BUU2 404 aaPredicted RBP14.05□□□□□ -0.16
COLCA1-201ENST00000355430 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 SLC4A4Q9Y6R1 1079 aa14.05□□□□□ -0.16
COLCA1-201ENST00000355430 MAGEB6P1A0A0J9YX57 407 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 A1BGP04217 495 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 WTAPQ15007 396 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 CENPHQ9H3R5 247 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 SIK1P57059 783 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 SPA17Q15506 151 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 TIGD1Q96MW7 591 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 LUC7LQ9NQ29 371 aaKnown RBP14.04□□□□□ -0.16
COLCA1-201ENST00000355430 HIBADHP31937 336 aaKnown RBP14.04□□□□□ -0.16
COLCA1-201ENST00000355430 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms