RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NAA30Q147X3 362 aaPredicted RBP28.51■■■□□ 2.15
CPNE1-202ENST00000352393 GORABQ5T7V8 394 aa28.51■■■□□ 2.15
CPNE1-202ENST00000352393 RGS22Q8NE09 1264 aa28.51■■■□□ 2.15
CPNE1-202ENST00000352393 RIC1Q4ADV7 1423 aa28.51■■■□□ 2.15
CPNE1-202ENST00000352393 KIF23Q02241 960 aaPredicted RBP28.51■■■□□ 2.15
CPNE1-202ENST00000352393 ZCRB1Q8TBF4 217 aaKnown RBP28.51■■■□□ 2.15
CPNE1-202ENST00000352393 PUS7LQ9H0K6 701 aaKnown RBP28.51■■■□□ 2.15
CPNE1-202ENST00000352393 AXDND1Q5T1B0 1012 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-202ENST00000352393 ZAP70P43403 619 aa28.49■■■□□ 2.15
CPNE1-202ENST00000352393 GTPBP4Q9BZE4 634 aaKnown RBP28.49■■■□□ 2.15
CPNE1-202ENST00000352393 NLRP12P59046 1061 aa28.49■■■□□ 2.15
CPNE1-202ENST00000352393 NKX1-1Q15270 411 aaPredicted RBP28.49■■■□□ 2.15
CPNE1-202ENST00000352393 ANO1Q5XXA6 986 aa28.49■■■□□ 2.15
CPNE1-202ENST00000352393 RALYLQ86SE5 291 aaKnown RBP28.49■■■□□ 2.15
CPNE1-202ENST00000352393 GJB4Q9NTQ9 266 aa28.49■■■□□ 2.15
CPNE1-202ENST00000352393 SLC3A2P08195 630 aaKnown RBP28.48■■■□□ 2.15
CPNE1-202ENST00000352393 ZRSR1Q15695 479 aaKnown RBP28.48■■■□□ 2.15
CPNE1-202ENST00000352393 HSP90AB3PQ58FF7 597 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 MROH7-TTC4A0A0A0MT08 1334 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 CPLX1O14810 134 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 ZNF202O95125 648 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 TCIRG1Q13488 830 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 XPO4Q9C0E2 1151 aaKnown RBP28.48■■■□□ 2.15
CPNE1-202ENST00000352393 OGFRQ9NZT2 677 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 WDR17Q8IZU2 1322 aa28.48■■■□□ 2.15
CPNE1-202ENST00000352393 ATRNO75882 1429 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 GPAA1O43292 621 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 CMA1P23946 247 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 RAB11FIP4Q86YS3 637 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 CCDC150Q8NCX0 1101 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 PLA2G12BQ9BX93 195 aa28.47■■■□□ 2.15
CPNE1-202ENST00000352393 TRMT1Q9NXH9 659 aaKnown RBP28.47■■■□□ 2.15
CPNE1-202ENST00000352393 KIF2AO00139 706 aaPredicted RBP28.46■■■□□ 2.15
CPNE1-202ENST00000352393 PFKFB1P16118 471 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 NCAPHQ15003 741 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 SYNE3Q6ZMZ3 975 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 TOGARAM1Q9Y4F4 1720 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 ZNF213O14771 459 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 TRIM28Q13263 835 aaKnown RBP28.46■■■□□ 2.15
CPNE1-202ENST00000352393 NBPF3Q9H094 633 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 IFNKQ9P0W0 207 aa28.46■■■□□ 2.15
CPNE1-202ENST00000352393 ZNF215Q9UL58 517 aaPredicted RBP28.46■■■□□ 2.15
CPNE1-202ENST00000352393 PI16Q6UXB8 463 aa28.45■■■□□ 2.15
CPNE1-202ENST00000352393 ZMYM6O95789 1325 aa28.45■■■□□ 2.14
CPNE1-202ENST00000352393 PCCAP05165 728 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-202ENST00000352393 ARMCX5Q6P1M9 558 aa28.45■■■□□ 2.14
CPNE1-202ENST00000352393 SMC2O95347 1197 aa28.44■■■□□ 2.14
CPNE1-202ENST00000352393 CSF1RP07333 972 aa28.44■■■□□ 2.14
CPNE1-202ENST00000352393 KCNJ6P48051 423 aa28.44■■■□□ 2.14
CPNE1-202ENST00000352393 SLC39A14Q15043 492 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 E4F1Q66K89 784 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-202ENST00000352393 TMC6Q7Z403 805 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 KIF18AQ8NI77 898 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 BIN1O00499 593 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 WDHD1O75717 1129 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-202ENST00000352393 TPM4P67936 248 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 ERO1AQ96HE7 468 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 TIGD1Q96MW7 591 aa28.43■■■□□ 2.14
CPNE1-202ENST00000352393 DDX41Q9UJV9 622 aaKnown RBP28.43■■■□□ 2.14
CPNE1-202ENST00000352393 MYO5AQ9Y4I1 1855 aaKnown RBP28.43■■■□□ 2.14
CPNE1-202ENST00000352393 DHX8Q14562 1220 aaKnown RBP28.42■■■□□ 2.14
CPNE1-202ENST00000352393 COL5A2P05997 1499 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-202ENST00000352393 IKBKBO14920 756 aa28.42■■■□□ 2.14
CPNE1-202ENST00000352393 ANGEL1Q9UNK9 670 aaKnown RBP28.42■■■□□ 2.14
CPNE1-202ENST00000352393 MCAMP43121 646 aa28.41■■■□□ 2.14
CPNE1-202ENST00000352393 TAF7LQ5H9L4 462 aa28.41■■■□□ 2.14
CPNE1-202ENST00000352393 CCDC85AQ96PX6 553 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-202ENST00000352393 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.41■■■□□ 2.143e-7■■■■■ 27.1
CPNE1-202ENST00000352393 HPSEQ9Y251 543 aa28.41■■■□□ 2.14
CPNE1-202ENST00000352393 PSDA5PKW4 1024 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-202ENST00000352393 ADD2P35612 726 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 IFIT5Q13325 482 aaKnown RBP28.4■■■□□ 2.14
CPNE1-202ENST00000352393 TBC1D10CQ8IV04 446 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 ZNF397Q8NF99 534 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-202ENST00000352393 PPP1R13BQ96KQ4 1090 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 TUBE1Q9UJT0 475 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 SH2B2O14492 632 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-202ENST00000352393 SFPQP23246 707 aaKnown RBP eCLIP28.4■■■□□ 2.148e-7■□□□□ 11.1
CPNE1-202ENST00000352393 TOM1L2Q6ZVM7 507 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 FAM89AQ96GI7 184 aa28.4■■■□□ 2.14
CPNE1-202ENST00000352393 ZBTB38Q8NAP3 1195 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-202ENST00000352393 AIFM3Q96NN9 605 aa28.39■■■□□ 2.14
CPNE1-202ENST00000352393 ALG1Q9BT22 464 aa28.39■■■□□ 2.14
CPNE1-202ENST00000352393 HSD3B7Q9H2F3 369 aa28.39■■■□□ 2.14
CPNE1-202ENST00000352393 DENND2AQ9ULE3 1009 aa28.39■■■□□ 2.14
CPNE1-202ENST00000352393 MYH3P11055 1940 aa28.39■■■□□ 2.14
CPNE1-202ENST00000352393 FAM237AA0A1B0GTK4 181 aa28.39■■■□□ 2.13
CPNE1-202ENST00000352393 CYB5R4Q7L1T6 521 aa28.39■■■□□ 2.13
CPNE1-202ENST00000352393 CADPS2Q86UW7 1296 aa28.39■■■□□ 2.13
CPNE1-202ENST00000352393 VPS37DQ86XT2 251 aa28.39■■■□□ 2.13
CPNE1-202ENST00000352393 NKX2-3Q8TAU0 364 aa28.39■■■□□ 2.13
CPNE1-202ENST00000352393 PPP6R2O75170 966 aa28.38■■■□□ 2.13
CPNE1-202ENST00000352393 TRDNQ13061 729 aa28.38■■■□□ 2.13
CPNE1-202ENST00000352393 ZNF512BQ96KM6 892 aaPredicted RBP28.38■■■□□ 2.13
CPNE1-202ENST00000352393 RIPOR2Q9Y4F9 1068 aa28.38■■■□□ 2.13
CPNE1-202ENST00000352393 CDKL5O76039 1030 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 SLU7O95391 586 aaKnown RBP28.37■■■□□ 2.13
CPNE1-202ENST00000352393 MARCKSP29966 332 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-202ENST00000352393 METAP2P50579 478 aaKnown RBP eCLIP28.37■■■□□ 2.13
CPNE1-202ENST00000352393 PTPAQ15257 358 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms