RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 UTP14AQ9BVJ6 771 aaKnown RBP21.56■■□□□ 1.04
SCARF1-202ENST00000348987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.56■■□□□ 1.04
SCARF1-202ENST00000348987 CWC15Q9P013 229 aaKnown RBP21.56■■□□□ 1.04
SCARF1-202ENST00000348987 ADAM21Q9UKJ8 722 aa21.56■■□□□ 1.04
SCARF1-202ENST00000348987 DHX16O60231 1041 aaKnown RBP21.55■■□□□ 1.04
SCARF1-202ENST00000348987 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
SCARF1-202ENST00000348987 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
SCARF1-202ENST00000348987 FMR1NBQ8N0W7 255 aaPredicted RBP21.55■■□□□ 1.04
SCARF1-202ENST00000348987 LMTK3Q96Q04 1460 aa21.55■■□□□ 1.04
SCARF1-202ENST00000348987 GUCY1B3Q02153 619 aa21.55■■□□□ 1.04
SCARF1-202ENST00000348987 MCMDC2Q4G0Z9 681 aa21.55■■□□□ 1.04
SCARF1-202ENST00000348987 GOLIM4O00461 696 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 LMOD1P29536 600 aaPredicted RBP21.54■■□□□ 1.04
SCARF1-202ENST00000348987 CASQ1P31415 396 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 FOXO4P98177 505 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 FBXO18Q8NFZ0 1043 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 GOLGA5Q8TBA6 731 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 ATG3Q9NT62 314 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 KIAA1468Q9P260 1216 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 ATG9AQ7Z3C6 839 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 SRLQ86TD4 932 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 PLBD2Q8NHP8 589 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 AK7Q96M32 723 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 ARFGAP3Q9NP61 516 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 PCDHA7Q9UN72 937 aa21.54■■□□□ 1.04
SCARF1-202ENST00000348987 CCP110O43303 1012 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 NDUFA8P51970 172 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 GOLGA8FQ08AF8 430 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 GOLGA8DPQ0D2H9 430 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 ZNF594Q96JF6 807 aaPredicted RBP21.53■■□□□ 1.04
SCARF1-202ENST00000348987 PRDM11Q9NQV5 511 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 MRPS27Q92552 414 aaKnown RBP21.53■■□□□ 1.04
SCARF1-202ENST00000348987 ZNF396Q96N95 335 aaPredicted RBP21.53■■□□□ 1.04
SCARF1-202ENST00000348987 FUT8Q9BYC5 575 aa21.53■■□□□ 1.04
SCARF1-202ENST00000348987 ATP1A3P13637 1013 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 NAA16Q6N069 864 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-202ENST00000348987 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 GPR161Q8N6U8 529 aaKnown RBP21.52■■□□□ 1.04
SCARF1-202ENST00000348987 PARD6BQ9BYG5 372 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 RRP15Q9Y3B9 282 aaKnown RBP21.52■■□□□ 1.04
SCARF1-202ENST00000348987 TNS3Q68CZ2 1445 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 A1BGP04217 495 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 KRT32Q14532 448 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 NCAPHQ15003 741 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 KBTBD3Q8NAB2 608 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 NSUN7Q8NE18 718 aaKnown RBP21.52■■□□□ 1.04
SCARF1-202ENST00000348987 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
SCARF1-202ENST00000348987 FANCCQ00597 558 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 LRRC24Q50LG9 513 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 ISM2Q6H9L7 571 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 EXOC4Q96A65 974 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 BPIFA3Q9BQP9 254 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-202ENST00000348987 H3BQF6 201 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 PAXIP1Q6ZW49 1069 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-202ENST00000348987 ILDR1Q86SU0 546 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-202ENST00000348987 ZBTB3Q9H5J0 574 aa21.51■■□□□ 1.03
SCARF1-202ENST00000348987 CTDNEP1O95476 244 aa21.5■■□□□ 1.03
SCARF1-202ENST00000348987 PTPDC1A2A3K4 754 aa21.5■■□□□ 1.03
SCARF1-202ENST00000348987 VWA3AA6NCI4 1184 aa21.5■■□□□ 1.03
SCARF1-202ENST00000348987 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
SCARF1-202ENST00000348987 H7C1W4 665 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
SCARF1-202ENST00000348987 DHX8Q14562 1220 aaKnown RBP21.49■■□□□ 1.03
SCARF1-202ENST00000348987 WDR24Q96S15 920 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 ZNF335Q9H4Z2 1342 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-202ENST00000348987 ACTN2P35609 894 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 PPP2R3AQ06190 1150 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 APOBRQ0VD83 1088 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 DPF2Q92785 391 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
SCARF1-202ENST00000348987 PAG1Q9NWQ8 432 aa21.49■■□□□ 1.03
SCARF1-202ENST00000348987 ADALQ6DHV7 355 aa21.48■■□□□ 1.03
SCARF1-202ENST00000348987 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
SCARF1-202ENST00000348987 COL18A1P39060 1754 aa21.48■■□□□ 1.03
SCARF1-202ENST00000348987 MAP3K9P80192 1104 aa21.48■■□□□ 1.03
SCARF1-202ENST00000348987 PSD3Q9NYI0 1048 aa21.48■■□□□ 1.03
SCARF1-202ENST00000348987 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
SCARF1-202ENST00000348987 NEDD4P46934 1319 aa21.48■■□□□ 1.03
SCARF1-202ENST00000348987 PFKFB2O60825 505 aa21.47■■□□□ 1.03
SCARF1-202ENST00000348987 GNG11P61952 73 aa21.47■■□□□ 1.03
SCARF1-202ENST00000348987 RSRC2Q7L4I2 434 aaKnown RBP21.47■■□□□ 1.03
SCARF1-202ENST00000348987 LLPHQ9BRT6 129 aaKnown RBP21.47■■□□□ 1.03
SCARF1-202ENST00000348987 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
SCARF1-202ENST00000348987 LONRF2Q1L5Z9 754 aa21.47■■□□□ 1.03
SCARF1-202ENST00000348987 ATL3Q6DD88 541 aa21.47■■□□□ 1.03
SCARF1-202ENST00000348987 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 UBASH3AP57075 661 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 NLRP12P59046 1061 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 TTLL5Q6EMB2 1281 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 HSD3B7Q9H2F3 369 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 PPP2R2CQ9Y2T4 447 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 DCCP43146 1447 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 GTF2A1P52655 376 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-202ENST00000348987 CWC25Q9NXE8 425 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-202ENST00000348987 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-202ENST00000348987 MRFAP1Q9Y605 127 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms