RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 Q6ZUG5 572 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 VPS36Q86VN1 386 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 RALGAPBQ86X10 1494 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 PHACTR2O75167 634 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 GNG11P61952 73 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 TRAF1Q13077 416 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 CETN2P41208 172 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 DTNBP1Q96EV8 351 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 BICD1Q96G01 975 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 RBSNQ9H1K0 784 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 CA8P35219 290 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 DYNC1I2Q13409 638 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 MCMDC2Q4G0Z9 681 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 DNAI2Q9GZS0 605 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 TACC1O75410 805 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 YEATS4O95619 227 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-202ENST00000348513 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 PRC1O43663 620 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 AMPD3Q01432 767 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 STX1AQ16623 288 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 TSC22D3Q99576 134 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 KRT23Q9C075 422 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 TFCP2Q12800 502 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 EYA1Q99502 592 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 PPP1R12CQ9BZL4 782 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 MAGEB6P1A0A0J9YX57 407 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 PTGS1P23219 599 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 RTN1Q16799 776 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 GIMAP6Q6P9H5 292 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 TBC1D31Q96DN5 1066 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 KCNA6P17658 529 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 GUCY2CP25092 1073 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ACTN2P35609 894 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ZNF804AQ7Z570 1209 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ESR2Q92731 530 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 NOL3O60936 208 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 GCP02774 474 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 IFT74Q96LB3 600 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 ZSWIM4Q9H7M6 989 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-202ENST00000348513 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 RAD50Q92878 1312 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 PSMD7P51665 324 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 PLS1Q14651 629 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 OGFOD1Q8N543 542 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ANKRD44Q8N8A2 993 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ABCC1P33527 1531 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 TPD52L2O43399 206 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 MARCKSP29966 332 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 EVCP57679 992 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 HDAC9Q9UKV0 1011 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 TEX14Q8IWB6 1497 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ZEB2O60315 1214 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 PRPF4BQ13523 1007 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ALDH1L1O75891 902 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 CAVIN2O95810 425 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ARHGAP45Q92619 1136 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
SMARCE1-202ENST00000348513 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.416e-7■■■■□ 23.4
SMARCE1-202ENST00000348513 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 FLT4P35916 1363 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 RXRAP19793 462 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 PRAG1Q86YV5 1406 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 HOXC9P31274 260 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 NUP153P49790 1475 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 MAP3K5Q99683 1374 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms