RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 SYKP43405 635 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 UBASH3AP57075 661 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 MST1RQ04912 1400 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 PRC1O43663 620 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ELOA2Q8IYF1 753 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC6B-202ENST00000347691 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CLCN6P51797 869 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 FOXO4P98177 505 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 KIF23Q02241 960 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 AXDND1Q5T1B0 1012 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 NEDD4P46934 1319 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 A0A087WWV3 80 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TRDNQ13061 729 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 VSTM4Q8IW00 320 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TMX1Q9H3N1 280 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ZNF446Q9NWS9 450 aa11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
TRAPPC6B-202ENST00000347691 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 BIN1O00499 593 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 PNMA6AP0CW24 399 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 FHOD1Q9Y613 1164 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 A0A1B0GUL7 405 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 M0R2C6 588 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CHGBP05060 677 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 GORABQ5T7V8 394 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 JAKMIP3Q5VZ66 844 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CPDO75976 1380 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CUTAO60888 179 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 GPS2Q13227 327 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CHST3Q7LGC8 479 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 APPBP2Q92624 585 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ZNF213O14771 459 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TADA3O75528 432 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CYP2C19P33261 490 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TIMM10P62072 90 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 TRIM29Q14134 588 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 NPHP1O15259 732 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CCDC102BQ68D86 513 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 HPS5Q9UPZ3 1129 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
TRAPPC6B-202ENST00000347691 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 TUBB4BP68371 445 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 OSBP2Q969R2 916 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 STX10O60499 249 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 CASQ1P31415 396 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 CABP4P57796 275 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 PARP4Q9UKK3 1724 aaKnown RBP11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 MYH7P12883 1935 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 NUP188Q5SRE5 1749 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 NWD2Q9ULI1 1742 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 TTLL5Q6EMB2 1281 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 OTUD7BQ6GQQ9 843 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 ANGEL1Q9UNK9 670 aaKnown RBP11.64□□□□□ -0.55
TRAPPC6B-202ENST00000347691 PKD1L3Q7Z443 1732 aa11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 FGAP02671 866 aa11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 REXO1L1PQ8IX06 675 aa11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 WASF1Q92558 559 aa11.63□□□□□ -0.55
TRAPPC6B-202ENST00000347691 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms