RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 KRT9P35527 623 aa14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 NOP2P46087 812 aaKnown RBP14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 PLIN2Q99541 437 aa14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 LUC7L2Q9Y383 392 aaKnown RBP14.22□□□□□ -0.13
SSX2IP-201ENST00000342203 AK9Q5TCS8 1911 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 ACTN2P35609 894 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 RNASE9P60153 205 aaKnown RBP14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 SLC9C2Q5TAH2 1124 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 TTC19Q6DKK2 380 aaPredicted RBP14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 CNGA4Q8IV77 575 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 KCNQ3O43525 872 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 OPA1O60313 960 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 CLIC6Q96NY7 704 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
SSX2IP-201ENST00000342203 MAP2K1Q02750 393 aaPredicted RBP14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 BRD3Q15059 726 aa14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 RGS22Q8NE09 1264 aa14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 SND1Q7KZF4 910 aaKnown RBP eCLIP14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 ADAM21Q9UKJ8 722 aa14.21□□□□□ -0.14
SSX2IP-201ENST00000342203 TRIM75PA6NK02 468 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 RNF113AO15541 343 aaKnown RBP14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 ZMYND10O75800 440 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 PRPF4BQ13523 1007 aaKnown RBP14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 RTN1Q16799 776 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 MFSD6Q6ZSS7 791 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 EHBP1Q8NDI1 1231 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 CCDC42Q96M95 316 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 TRIM66O15016 1216 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 SLFN14P0C7P3 912 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 CDC25BP30305 580 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 ARID5AQ03989 594 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 PLA2G4DQ86XP0 818 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
SSX2IP-201ENST00000342203 NEFHP12036 1026 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 SPAG1Q07617 926 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 WTAPQ15007 396 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 TAB2Q9NYJ8 693 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 MAST1Q9Y2H9 1570 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 B4E1Z4 1266 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 AP5Z1O43299 807 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 MAP2K2P36507 400 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 CCT5P48643 541 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 RABGGTAQ92696 567 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 NAA15Q9BXJ9 866 aaKnown RBP14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 FAM204AQ9H8W3 233 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 TACC1O75410 805 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 KRT40Q6A162 431 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 MKRN1Q9UHC7 482 aaKnown RBP14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 JRKLQ9Y4A0 524 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 GOLGA6BA6NDN3 693 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 PCDHA5Q9Y5H7 936 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 E7EWF7 191 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 COBLO75128 1261 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 CFAP58Q5T655 872 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 BCAS4Q8TDM0 211 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 IL25Q9H293 177 aa14.19□□□□□ -0.14
SSX2IP-201ENST00000342203 TUBBP07437 444 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 NAA25Q14CX7 972 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 PI4K2BQ8TCG2 481 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 ERCC3P19447 782 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 CTNND2Q9UQB3 1225 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 CYP21A2P08686 494 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 ADD1P35611 737 aaKnown RBP14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 CTIFO43310 598 aaKnown RBP14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 TAF5LO75529 589 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 ATP10AO60312 1499 aa14.18□□□□□ -0.14
SSX2IP-201ENST00000342203 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 EZRP15311 586 aaKnown RBP14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 VAV2P52735 878 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 ATP2B2Q01814 1243 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 TTC14Q96N46 770 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 CWC25Q9NXE8 425 aaPredicted RBP14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
SSX2IP-201ENST00000342203 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms