RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SPATA5Q8NB90 893 aa23.56■■□□□ 1.36
SPG7-202ENST00000341316 RCOR1Q9UKL0 485 aa23.56■■□□□ 1.36
SPG7-202ENST00000341316 SPATA31A5Q5VU36 1347 aa23.56■■□□□ 1.36
SPG7-202ENST00000341316 SPATA31A7Q8IWB4 1347 aa23.56■■□□□ 1.36
SPG7-202ENST00000341316 DNTTIP2Q5QJE6 756 aaKnown RBP23.56■■□□□ 1.36
SPG7-202ENST00000341316 DDX60Q8IY21 1712 aaKnown RBP23.55■■□□□ 1.36
SPG7-202ENST00000341316 KCNQ2O43526 872 aa23.55■■□□□ 1.36
SPG7-202ENST00000341316 NTSR2O95665 410 aa23.55■■□□□ 1.36
SPG7-202ENST00000341316 APPP05067 770 aa23.55■■□□□ 1.36
SPG7-202ENST00000341316 MAP7D2Q96T17 732 aa23.55■■□□□ 1.36
SPG7-202ENST00000341316 MPHOSPH8Q99549 860 aa23.55■■□□□ 1.36
SPG7-202ENST00000341316 MYH14Q7Z406 1995 aaKnown RBP23.55■■□□□ 1.36
SPG7-202ENST00000341316 SLC5A1P13866 664 aa23.54■■□□□ 1.36
SPG7-202ENST00000341316 CYB5R4Q7L1T6 521 aa23.54■■□□□ 1.36
SPG7-202ENST00000341316 STRBPQ96SI9 672 aaKnown RBP23.54■■□□□ 1.36
SPG7-202ENST00000341316 NIP7Q9Y221 180 aaKnown RBP eCLIP23.54■■□□□ 1.36
SPG7-202ENST00000341316 ARAP2Q8WZ64 1704 aa23.54■■□□□ 1.36
SPG7-202ENST00000341316 PLCB2Q00722 1185 aa23.54■■□□□ 1.36
SPG7-202ENST00000341316 MYH15Q9Y2K3 1946 aa23.54■■□□□ 1.36
SPG7-202ENST00000341316 NOLC1Q14978 699 aaKnown RBP eCLIP23.53■■□□□ 1.36
SPG7-202ENST00000341316 C17orf53Q8N3J3 647 aaPredicted RBP23.53■■□□□ 1.36
SPG7-202ENST00000341316 RREB1Q92766 1687 aa23.53■■□□□ 1.36
SPG7-202ENST00000341316 ZMYND15Q9H091 742 aa23.53■■□□□ 1.36
SPG7-202ENST00000341316 GOLPH3LQ9H4A5 285 aa23.53■■□□□ 1.36
SPG7-202ENST00000341316 GJB4Q9NTQ9 266 aa23.53■■□□□ 1.36
SPG7-202ENST00000341316 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 FAM200AQ8TCP9 573 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 INCENPQ9NQS7 918 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 PHLPP1O60346 1717 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 COL4A1P02462 1669 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 BCAMP50895 628 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 ANO6Q4KMQ2 910 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 LUZP1Q86V48 1076 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 MAGEB6Q8N7X4 407 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 CHMP4CQ96CF2 233 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 SENP2Q9HC62 589 aa23.52■■□□□ 1.36
SPG7-202ENST00000341316 CCDC152Q4G0S7 254 aa23.51■■□□□ 1.35
SPG7-202ENST00000341316 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
SPG7-202ENST00000341316 EPB41L4AQ9HCS5 686 aaPredicted RBP23.51■■□□□ 1.35
SPG7-202ENST00000341316 CCAR1Q8IX12 1150 aaKnown RBP23.5■■□□□ 1.35
SPG7-202ENST00000341316 ORC3Q9UBD5 711 aaPredicted RBP23.5■■□□□ 1.35
SPG7-202ENST00000341316 NEDD4P46934 1319 aa23.5■■□□□ 1.35
SPG7-202ENST00000341316 B4E1Z4 1266 aa23.5■■□□□ 1.35
SPG7-202ENST00000341316 TRDNQ13061 729 aa23.5■■□□□ 1.35
SPG7-202ENST00000341316 ZNF396Q96N95 335 aaPredicted RBP23.5■■□□□ 1.35
SPG7-202ENST00000341316 LTBP4Q8N2S1 1624 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 MBD4O95243 580 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 MYRIPQ8NFW9 859 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 C8orf76Q96K31 380 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 CBX8Q9HC52 389 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 ANGEL1Q9UNK9 670 aaKnown RBP23.49■■□□□ 1.35
SPG7-202ENST00000341316 TACC3Q9Y6A5 838 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 SH2B2O14492 632 aaPredicted RBP23.49■■□□□ 1.35
SPG7-202ENST00000341316 DHX16O60231 1041 aaKnown RBP23.49■■□□□ 1.35
SPG7-202ENST00000341316 ATL3Q6DD88 541 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 FBXO18Q8NFZ0 1043 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 ARMT1Q9H993 441 aa23.49■■□□□ 1.35
SPG7-202ENST00000341316 RXRAP19793 462 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 KCNQ4P56696 695 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 SNW1Q13573 536 aaKnown RBP23.48■■□□□ 1.35
SPG7-202ENST00000341316 BARGINQ6ZT62 677 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 RTL9Q8NET4 1388 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 IGHMBP2P38935 993 aaKnown RBP23.48■■□□□ 1.35
SPG7-202ENST00000341316 CHRNDQ07001 517 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 MAP3K12Q12852 859 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 IFNL3Q8IZI9 196 aa23.48■■□□□ 1.35
SPG7-202ENST00000341316 PATL2C9JE40 543 aaKnown RBP23.47■■□□□ 1.35
SPG7-202ENST00000341316 CPLX1O14810 134 aa23.47■■□□□ 1.35
SPG7-202ENST00000341316 ALX1Q15699 326 aa23.47■■□□□ 1.35
SPG7-202ENST00000341316 C3orf67Q6ZVT6 689 aa23.47■■□□□ 1.35
SPG7-202ENST00000341316 WTIPA6NIX2 430 aaPredicted RBP23.47■■□□□ 1.35
SPG7-202ENST00000341316 PRKAB2O43741 272 aa23.47■■□□□ 1.35
SPG7-202ENST00000341316 POLR3DP05423 398 aaPredicted RBP23.47■■□□□ 1.35
SPG7-202ENST00000341316 SPTLC3Q9NUV7 552 aa23.47■■□□□ 1.35
SPG7-202ENST00000341316 CICQ96RK0 1608 aaPredicted RBP23.46■■□□□ 1.35
SPG7-202ENST00000341316 C4AP0C0L4 1744 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 C4BP0C0L5 1744 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 DOCK2Q92608 1830 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 CTDSPL2Q05D32 466 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 SMIM5Q71RC9 77 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 ENGASEQ8NFI3 743 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 IGDCC4Q8TDY8 1250 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 AIFM3Q96NN9 605 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 RTEL1Q9NZ71 1219 aa23.46■■□□□ 1.35
SPG7-202ENST00000341316 GSG1L2A8MUP6 293 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 KIF28PB7ZC32 967 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 ME1P48163 572 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 LINC00116Q8NCU8 138 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 PRIMPOLQ96LW4 560 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 DNAJC25Q9H1X3 360 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 CLIC4Q9Y696 253 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 ZMYM6O95789 1325 aa23.45■■□□□ 1.35
SPG7-202ENST00000341316 CDC27P30260 824 aa23.45■■□□□ 1.34
SPG7-202ENST00000341316 APOA5Q6Q788 366 aa23.45■■□□□ 1.34
SPG7-202ENST00000341316 MTERF4Q7Z6M4 381 aaKnown RBP23.45■■□□□ 1.34
SPG7-202ENST00000341316 PCDHA7Q9UN72 937 aa23.45■■□□□ 1.34
SPG7-202ENST00000341316 BCL9LQ86UU0 1499 aa23.45■■□□□ 1.34
SPG7-202ENST00000341316 LCORLQ8N3X6 602 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms