RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF213O14771 459 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 PRR5LQ6MZQ0 368 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 VPS37DQ86XT2 251 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 CNBD1Q8NA66 436 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 GTF3C6Q969F1 213 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 ZNF831Q5JPB2 1677 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 GSG1L2A8MUP6 293 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 F13A1P00488 732 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 XRCC6P12956 609 aaKnown RBP eCLIP8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 MAP3K12Q12852 859 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 UBE4AQ14139 1066 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 ANKRD1Q15327 319 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 KLHL40Q2TBA0 621 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 BRWD3Q6RI45 1802 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 ZNF804BA4D1E1 1349 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 B4E1Z4 1266 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 RXRAP19793 462 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 PDIA3P30101 505 aaKnown RBP8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 DDR1Q08345 913 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 ZNF827Q17R98 1081 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 CYB5R4Q7L1T6 521 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 RAI14Q9P0K7 980 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 LY75O60449 1722 aa8.76□□□□□ -1.01
SRFBP1-201ENST00000339397 CARMIL3Q8ND23 1372 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 FSD2A1L4K1 749 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 FIBPO43427 364 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 SERPINB2P05120 415 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 DYNLL1P63167 89 aaKnown RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 CHAF1AQ13111 956 aaPredicted RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 ZSCAN25Q6NSZ9 544 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 MB21D2Q8IYB1 491 aaPredicted RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 IFNL3Q8IZI9 196 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 AGXT2Q9BYV1 514 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 GJB4Q9NTQ9 266 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 SCN7AQ01118 1682 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 CYP2D7A0A087X1C5 515 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 PRC1O43663 620 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 KDM4AO75164 1064 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 CYP7A1P22680 504 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 PRDX5P30044 214 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 OLFM4Q6UX06 510 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 FBXO33Q7Z6M2 555 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 TICAM2Q86XR7 235 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 ANKIB1Q9P2G1 1089 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 TFIP11Q9UBB9 837 aaKnown RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 CTNNA3Q9UI47 895 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 NEDD4P46934 1319 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 LAMB2P55268 1798 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 GUCY1B3Q02153 619 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 GRIK5Q16478 980 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 SKOR2Q2VWA4 1001 aaPredicted RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 CAVIN4Q5BKX8 364 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 SLC4A4Q9Y6R1 1079 aa8.75□□□□□ -1.01
SRFBP1-201ENST00000339397 MYH7P12883 1935 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 C4AP0C0L4 1744 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 CASZ1Q86V15 1759 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 GOLGA6L3A6NEY3 463 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 PFKFB2O60825 505 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 APBA3O96018 575 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 HMGB1P09429 215 aaKnown RBP8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 SLC4A8Q2Y0W8 1093 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 ZSCAN23Q3MJ62 389 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 OTUD7BQ6GQQ9 843 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 ZKSCAN3Q9BRR0 538 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 HPS5Q9UPZ3 1129 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 TNRC6CQ9HCJ0 1690 aaKnown RBP8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 CCDC144CPQ8IYA2 1237 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 IL27Q8NEV9 243 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 NCOA7Q8NI08 942 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 MYL10Q9BUA6 226 aa8.74□□□□□ -1.01
SRFBP1-201ENST00000339397 UBE2Q2LH0YL09 131 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 FDPSP14324 419 aaKnown RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 MCM5P33992 734 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 COL23A1Q86Y22 540 aaPredicted RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 NAPBQ9H115 298 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 KLF18A0A0U1RQI7 1052 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 ADD1P35611 737 aaKnown RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 RBM6P78332 1123 aaKnown RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 MECOMQ03112 1051 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 RALYLQ86SE5 291 aaKnown RBP8.73□□□□□ -1.01
SRFBP1-201ENST00000339397 SYCE3A1L190 88 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 PTPDC1A2A3K4 754 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 MINDY4BA8MYZ0 360 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 POLRMTO00411 1230 aaKnown RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 RGL2O15211 777 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 GRAPQ13588 217 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms