RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 MYL5Q02045 173 aa23.47■■□□□ 1.35
RUNX3-202ENST00000338888 NBPF6Q5VWK0 638 aa23.47■■□□□ 1.35
RUNX3-202ENST00000338888 RABGGTAQ92696 567 aa23.47■■□□□ 1.35
RUNX3-202ENST00000338888 ZNF274Q96GC6 653 aaPredicted RBP23.47■■□□□ 1.35
RUNX3-202ENST00000338888 C8orf76Q96K31 380 aa23.47■■□□□ 1.35
RUNX3-202ENST00000338888 NBPF4Q96M43 638 aa23.47■■□□□ 1.35
RUNX3-202ENST00000338888 GPHNQ9NQX3 736 aaPredicted RBP23.47■■□□□ 1.35
RUNX3-202ENST00000338888 MARCKSP29966 332 aaPredicted RBP23.46■■□□□ 1.35
RUNX3-202ENST00000338888 HSP90AA4PQ58FG1 418 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 MYSM1Q5VVJ2 828 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 SRLQ86TD4 932 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 PDILTQ8N807 584 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 DHX58Q96C10 678 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 AXDND1Q5T1B0 1012 aaPredicted RBP23.46■■□□□ 1.35
RUNX3-202ENST00000338888 SYNE3Q6ZMZ3 975 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 FANCLQ9NW38 375 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 ZNF530Q6P9A1 599 aaPredicted RBP23.46■■□□□ 1.35
RUNX3-202ENST00000338888 TOGARAM2Q6ZUX3 1019 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 GOLGA1Q92805 767 aa23.46■■□□□ 1.35
RUNX3-202ENST00000338888 BAG1Q99933 345 aaPredicted RBP23.46■■□□□ 1.35
RUNX3-202ENST00000338888 RRP15Q9Y3B9 282 aaKnown RBP23.46■■□□□ 1.35
RUNX3-202ENST00000338888 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 EFCC1Q9HA90 598 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 ATG3Q9NT62 314 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 PSD3Q9NYI0 1048 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
RUNX3-202ENST00000338888 CMA1P23946 247 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 ACTN2P35609 894 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.34
RUNX3-202ENST00000338888 MROH7-TTC4A0A0A0MT08 1334 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 DDX58O95786 925 aaKnown RBP23.44■■□□□ 1.34
RUNX3-202ENST00000338888 KIFC2Q96AC6 838 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 HAUS7Q99871 368 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 TXLNAP40222 546 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 PNOCQ13519 176 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 ANO1Q5XXA6 986 aa23.44■■□□□ 1.34
RUNX3-202ENST00000338888 KIF28PB7ZC32 967 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 SYKP43405 635 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 MCM6Q14566 821 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 KARSQ15046 597 aaKnown RBP23.43■■□□□ 1.34
RUNX3-202ENST00000338888 RAB11FIP4Q86YS3 637 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 INTS13Q9NVM9 706 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 VPS18Q9P253 973 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 TUBE1Q9UJT0 475 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 NOP2P46087 812 aaKnown RBP23.43■■□□□ 1.34
RUNX3-202ENST00000338888 ADKP55263 362 aaKnown RBP23.43■■□□□ 1.34
RUNX3-202ENST00000338888 KBTBD3Q8NAB2 608 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 DESI2Q9BSY9 194 aa23.43■■□□□ 1.34
RUNX3-202ENST00000338888 MARF1Q9Y4F3 1742 aaKnown RBP23.43■■□□□ 1.34
RUNX3-202ENST00000338888 KDM3BQ7LBC6 1761 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
RUNX3-202ENST00000338888 PDE11AQ9HCR9 933 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 TAOK2Q9UL54 1235 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 MED1Q15648 1581 aaPredicted RBP23.42■■□□□ 1.34
RUNX3-202ENST00000338888 LAMA4Q16363 1823 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 CCDC151A5D8V7 595 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 GOLGA6L9A6NEM1 432 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 MAP2K7O14733 419 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 DHX16O60231 1041 aaKnown RBP23.42■■□□□ 1.34
RUNX3-202ENST00000338888 AKAP4Q5JQC9 854 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 CCDC12Q8WUD4 166 aaPredicted RBP23.42■■□□□ 1.34
RUNX3-202ENST00000338888 IRX2Q9BZI1 471 aaPredicted RBP23.42■■□□□ 1.34
RUNX3-202ENST00000338888 TMEM94Q12767 1356 aa23.42■■□□□ 1.34
RUNX3-202ENST00000338888 ATF3P18847 181 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 SH3TC1Q8TE82 1336 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 GOLIM4O00461 696 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 PTPN12Q05209 780 aaKnown RBP23.41■■□□□ 1.34
RUNX3-202ENST00000338888 TTLL5Q6EMB2 1281 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 LEKR1Q6ZMV7 388 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 KRT28Q7Z3Y7 464 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 DSCC1Q9BVC3 393 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 COPRSQ9NQ92 184 aa23.41■■□□□ 1.34
RUNX3-202ENST00000338888 RFX7Q2KHR2 1363 aa23.4■■□□□ 1.34
RUNX3-202ENST00000338888 HSPD1P10809 573 aaKnown RBP23.4■■□□□ 1.34
RUNX3-202ENST00000338888 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
RUNX3-202ENST00000338888 NEURL1BA8MQ27 555 aa23.4■■□□□ 1.34
RUNX3-202ENST00000338888 IRX3P78415 501 aaPredicted RBP23.4■■□□□ 1.34
RUNX3-202ENST00000338888 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
RUNX3-202ENST00000338888 BRAPQ7Z569 592 aa23.4■■□□□ 1.34
RUNX3-202ENST00000338888 GCKRQ14397 625 aa23.39■■□□□ 1.34
RUNX3-202ENST00000338888 BRD3Q15059 726 aa23.39■■□□□ 1.34
RUNX3-202ENST00000338888 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.34
RUNX3-202ENST00000338888 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.33
RUNX3-202ENST00000338888 STX10O60499 249 aa23.39■■□□□ 1.33
RUNX3-202ENST00000338888 TC2NQ8N9U0 490 aa23.39■■□□□ 1.33
RUNX3-202ENST00000338888 IQUBQ8NA54 791 aa23.39■■□□□ 1.33
RUNX3-202ENST00000338888 MYD88Q99836 296 aa23.39■■□□□ 1.33
RUNX3-202ENST00000338888 DDX21Q9NR30 783 aaKnown RBP eCLIP23.39■■□□□ 1.33
RUNX3-202ENST00000338888 NEXNQ0ZGT2 675 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 TBX2Q13207 712 aaPredicted RBP23.38■■□□□ 1.33
RUNX3-202ENST00000338888 MRC1P22897 1456 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 N4BP1O75113 896 aaKnown RBP23.38■■□□□ 1.33
RUNX3-202ENST00000338888 MYL6BP14649 208 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 RFX5P48382 616 aaPredicted RBP23.38■■□□□ 1.33
RUNX3-202ENST00000338888 CHMP4BP1P59074 171 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 FOXR1Q6PIV2 292 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 CHMP4CQ96CF2 233 aa23.38■■□□□ 1.33
RUNX3-202ENST00000338888 KIF23Q02241 960 aaPredicted RBP23.37■■□□□ 1.33
RUNX3-202ENST00000338888 PDE4BQ07343 736 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 SLC39A14Q15043 492 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms