RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 USP16Q9Y5T5 823 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 ARHGEF37A1IGU5 675 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 IQCA1LA6NCM1 817 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 VIMP08670 466 aaKnown RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 HCLS1P14317 486 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 FAM182BQ5T319 152 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 CEP85Q6P2H3 762 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 IQSEC3Q9UPP2 1182 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 TRIM37O94972 964 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
EPHA3-201ENST00000336596 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 ACTN2P35609 894 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 NAPAP54920 295 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 DDX11Q96FC9 970 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 CEP83Q9Y592 693 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 K7ELQ4 463 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-201ENST00000336596 GNPTABQ3T906 1256 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
EPHA3-201ENST00000336596 SKAP1Q86WV1 359 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-201ENST00000336596 CHURC1Q8WUH1 139 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 STX8Q9UNK0 236 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 MCM3P25205 808 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 UBA7P41226 1012 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 NUCB1Q02818 461 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 CCDC83Q8IWF9 413 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 GABPB2Q8TAK5 448 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-201ENST00000336596 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
EPHA3-201ENST00000336596 ADRA2BP18089 450 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 RTN1Q16799 776 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 MCF2L2Q86YR7 1114 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 SYNCQ9H7C4 482 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 ZBTB40Q9NUA8 1239 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 COMMD10Q9Y6G5 202 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-201ENST00000336596 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
EPHA3-201ENST00000336596 IFT74Q96LB3 600 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-201ENST00000336596 H0YCG3 227 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 SEMA3EO15041 775 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 RNF113AO15541 343 aaKnown RBP8.37□□□□□ -1.07
EPHA3-201ENST00000336596 USO1O60763 962 aaKnown RBP8.37□□□□□ -1.07
EPHA3-201ENST00000336596 CTNNA2P26232 953 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 SMTNP53814 917 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 CCDC40Q4G0X9 1142 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 TTLL7Q6ZT98 887 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 AXIN2Q9Y2T1 843 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 DEPDC5O75140 1603 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 BMP2KLQ5H9B9 411 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 MCM9Q9NXL9 1143 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 ERLIN1O75477 346 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 LIG1P18858 919 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 TTC22Q5TAA0 569 aa8.37□□□□□ -1.07
EPHA3-201ENST00000336596 BCORL1Q5H9F3 1711 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 ITGA6P23229 1130 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 MCMDC2Q4G0Z9 681 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 HELLSQ9NRZ9 838 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 USP31Q70CQ4 1352 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 BACH1O14867 736 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 SLU7O95391 586 aaKnown RBP8.36□□□□□ -1.07
EPHA3-201ENST00000336596 ABCD1P33897 745 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 SPOUT1Q5T280 376 aaKnown RBP8.36□□□□□ -1.07
EPHA3-201ENST00000336596 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 VWDEQ8N2E2 1590 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 ZBTB43O43298 467 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 FAM13AO94988 1023 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 GCKRQ14397 625 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 KIAA1524Q8TCG1 905 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 SPON1Q9HCB6 807 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 DIP2AQ14689 1571 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 ZBTB7BO15156 539 aaPredicted RBP8.36□□□□□ -1.07
EPHA3-201ENST00000336596 GAS8O95995 478 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 PDE1AP54750 535 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 YWHAEP62258 255 aaKnown RBP8.36□□□□□ -1.07
EPHA3-201ENST00000336596 TCHPQ9BT92 498 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 ABT1Q9ULW3 272 aaKnown RBP8.36□□□□□ -1.07
EPHA3-201ENST00000336596 PTPRUQ92729 1446 aa8.36□□□□□ -1.07
EPHA3-201ENST00000336596 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
EPHA3-201ENST00000336596 TFCP2Q12800 502 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 HAUS3Q68CZ6 603 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 DCTPP1Q9H773 170 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 ANO10Q9NW15 660 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 RNF123Q5XPI4 1314 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
EPHA3-201ENST00000336596 ATP10DQ9P241 1426 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 GOLGA6L7A0A1B0GV03 622 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 COPB2P35606 906 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
EPHA3-201ENST00000336596 NEK1Q96PY6 1258 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms