RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GPAA1O43292 621 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 KRT18P05783 430 aaKnown RBP7.46□□□□□ -1.21
HMG20A-201ENST00000336216 LMOD1P29536 600 aaPredicted RBP7.46□□□□□ -1.21
HMG20A-201ENST00000336216 TXLNAP40222 546 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 WTAPQ15007 396 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 NAA16Q6N069 864 aaPredicted RBP7.46□□□□□ -1.21
HMG20A-201ENST00000336216 TIGD1Q96MW7 591 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 FEZ1Q99689 392 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 DNAI1Q9UI46 699 aa7.46□□□□□ -1.21
HMG20A-201ENST00000336216 ARHGEF10O15013 1369 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 TMCO3Q6UWJ1 677 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 ZBTB1Q9Y2K1 713 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 XRN1Q8IZH2 1706 aaKnown RBP7.46□□□□□ -1.22
HMG20A-201ENST00000336216 SASH1O94885 1247 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 HOXB7P09629 217 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 NCBP1Q09161 790 aaKnown RBP7.46□□□□□ -1.22
HMG20A-201ENST00000336216 GPS2Q13227 327 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.22
HMG20A-201ENST00000336216 PLIN2Q99541 437 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 TPCN1Q9ULQ1 816 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 SH3TC1Q8TE82 1336 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 LRRC7Q96NW7 1537 aa7.46□□□□□ -1.22
HMG20A-201ENST00000336216 OVOS2A0A0J9YW53 1432 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 OVOS2Q6IE36 1432 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 TOM1O60784 492 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 CTDSPL2Q05D32 466 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
HMG20A-201ENST00000336216 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 ERCC6LQ2NKX8 1250 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 ARHGAP29Q52LW3 1261 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 CATIPQ7Z7H3 387 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
HMG20A-201ENST00000336216 TANGO6Q9C0B7 1094 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 LMTK3Q96Q04 1460 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 AP5Z1O43299 807 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 RPS6KB1P23443 525 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 UTP14CQ5TAP6 766 aaKnown RBP7.45□□□□□ -1.22
HMG20A-201ENST00000336216 GREM2Q9H772 168 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 ST7Q9NRC1 585 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 MCM9Q9NXL9 1143 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 MRVI1Q9Y6F6 885 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 SLU7O95391 586 aaKnown RBP7.45□□□□□ -1.22
HMG20A-201ENST00000336216 TCIRG1Q13488 830 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 ZNF397Q8NF99 534 aaPredicted RBP7.45□□□□□ -1.22
HMG20A-201ENST00000336216 ANO10Q9NW15 660 aa7.45□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC196A0A1B0GTZ2 297 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 IGKV5-2P06315 115 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 FTOQ9C0B1 505 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 ZFYP08048 801 aaPredicted RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 IDEP14735 1019 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 GYG1P46976 350 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 BCAMP50895 628 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 DNA2P51530 1060 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 EIF6P56537 245 aaKnown RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 FILIP1LQ4L180 1135 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 PPFIBP1Q86W92 1011 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 GPHNQ9NQX3 736 aaPredicted RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 CALCOCO1Q9P1Z2 691 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 MON2Q7Z3U7 1717 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 AKAP12Q02952 1782 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 UQCRFS1P1P0C7P4 283 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 EPS15P42566 896 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 SYKP43405 635 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 STX17P56962 302 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 STX1AQ16623 288 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 IFIT1BQ5T764 474 aaKnown RBP7.44□□□□□ -1.22
HMG20A-201ENST00000336216 TAF3Q5VWG9 929 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 TPTE2Q6XPS3 522 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 SEC31BQ9NQW1 1179 aa7.44□□□□□ -1.22
HMG20A-201ENST00000336216 USP27XA6NNY8 438 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 BMS1Q14692 1282 aaKnown RBP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 RTN1Q16799 776 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 RNF41Q9H4P4 317 aaPredicted RBP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 BABAM1Q9NWV8 329 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 IFNKQ9P0W0 207 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 SAP30BPQ9UHR5 308 aaKnown RBP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 RGS12O14924 1447 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 SDR42E1Q8WUS8 393 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 STAMQ92783 540 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 ZNF532Q9HCE3 1301 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 ERCC3P19447 782 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 PHKA1P46020 1223 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 LMAN1P49257 510 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC144BQ3MJ40 725 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 CERS3Q8IU89 383 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 WASF1Q92558 559 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 GJB4Q9NTQ9 266 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 AATFQ9NY61 560 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 MAGEB6P1A0A0J9YX57 407 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 SPTLC2O15270 562 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 CYP21A2P08686 494 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms