RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ADD1P35611 737 aaKnown RBP20.4■□□□□ 0.86
DDX28-201ENST00000332395 KCNQ4P56696 695 aa20.4■□□□□ 0.86
DDX28-201ENST00000332395 ERFEQ4G0M1 354 aa20.4■□□□□ 0.86
DDX28-201ENST00000332395 DACT1Q9NYF0 836 aa20.4■□□□□ 0.86
DDX28-201ENST00000332395 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
DDX28-201ENST00000332395 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
DDX28-201ENST00000332395 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
DDX28-201ENST00000332395 MBD4O95243 580 aa20.39■□□□□ 0.85
DDX28-201ENST00000332395 ALX1Q15699 326 aa20.39■□□□□ 0.85
DDX28-201ENST00000332395 GUCY1B3Q02153 619 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 BICD2Q8TD16 824 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
DDX28-201ENST00000332395 ANGEL1Q9UNK9 670 aaKnown RBP20.38■□□□□ 0.85
DDX28-201ENST00000332395 PATL2C9JE40 543 aaKnown RBP20.38■□□□□ 0.85
DDX28-201ENST00000332395 CCDC192P0DO97 292 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 CAMK4Q16566 473 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 CYB5R4Q7L1T6 521 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
DDX28-201ENST00000332395 EPB41L4AQ9HCS5 686 aaPredicted RBP20.38■□□□□ 0.85
DDX28-201ENST00000332395 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
DDX28-201ENST00000332395 MSNP26038 577 aaKnown RBP20.37■□□□□ 0.85
DDX28-201ENST00000332395 CEBPZQ03701 1054 aaKnown RBP20.37■□□□□ 0.85
DDX28-201ENST00000332395 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
DDX28-201ENST00000332395 RAB11FIP4Q86YS3 637 aa20.37■□□□□ 0.85
DDX28-201ENST00000332395 IFNL3Q8IZI9 196 aa20.37■□□□□ 0.85
DDX28-201ENST00000332395 ARMT1Q9H993 441 aa20.37■□□□□ 0.85
DDX28-201ENST00000332395 CPLX1O14810 134 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 ATL3Q6DD88 541 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 PTF1AQ7RTS3 328 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 ANKRD18AQ8IVF6 992 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 NAPBQ9H115 298 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 TNMDQ9H2S6 317 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
DDX28-201ENST00000332395 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 B4E1Z4 1266 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 SH2B2O14492 632 aaPredicted RBP20.36■□□□□ 0.85
DDX28-201ENST00000332395 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
DDX28-201ENST00000332395 ZNF396Q96N95 335 aaPredicted RBP20.36■□□□□ 0.85
DDX28-201ENST00000332395 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDX28-201ENST00000332395 CCDC39Q9UFE4 941 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 USP25Q9UHP3 1055 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 RCOR1Q9UKL0 485 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 NEDD4P46934 1319 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
DDX28-201ENST00000332395 A0A1B0GUL6 1792 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 RGL2O15211 777 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 NR1I2O75469 434 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 USP28Q96RU2 1077 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 CLSTN2Q9H4D0 955 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 ORC3Q9UBD5 711 aaPredicted RBP20.35■□□□□ 0.85
DDX28-201ENST00000332395 UBAP1LF5GYI3 381 aa20.35■□□□□ 0.85
DDX28-201ENST00000332395 GSG1L2A8MUP6 293 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 C8orf76Q96K31 380 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 TMEM87BQ96K49 555 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 BSDC1Q9NW68 430 aaPredicted RBP20.34■□□□□ 0.85
DDX28-201ENST00000332395 LRP2BPQ9P2M1 347 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 TAF1P21675 1872 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 RBM43Q6ZSC3 357 aaKnown RBP20.34■□□□□ 0.85
DDX28-201ENST00000332395 FNBP4Q8N3X1 1017 aaPredicted RBP20.34■□□□□ 0.85
DDX28-201ENST00000332395 LCORLQ8N3X6 602 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
DDX28-201ENST00000332395 GNAT2P19087 354 aa20.33■□□□□ 0.85
DDX28-201ENST00000332395 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
DDX28-201ENST00000332395 CHD4Q14839 1912 aa20.33■□□□□ 0.85
DDX28-201ENST00000332395 TIAM2Q8IVF5 1701 aa20.33■□□□□ 0.85
DDX28-201ENST00000332395 CKAP2LQ8IYA6 745 aa20.33■□□□□ 0.85
DDX28-201ENST00000332395 FBXO18Q8NFZ0 1043 aa20.33■□□□□ 0.85
DDX28-201ENST00000332395 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.33■□□□□ 0.85
DDX28-201ENST00000332395 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.85
DDX28-201ENST00000332395 BTAF1O14981 1849 aa20.33■□□□□ 0.84
DDX28-201ENST00000332395 PRKAB2O43741 272 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 METAP2P50579 478 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX28-201ENST00000332395 TYRO3Q06418 890 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 RC3H1Q5TC82 1133 aaKnown RBP20.32■□□□□ 0.84
DDX28-201ENST00000332395 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 APOA5Q6Q788 366 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 INCENPQ9NQS7 918 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 KDM4AO75164 1064 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 GYG1P46976 350 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 CTDSPL2Q05D32 466 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 IGDCC4Q8TDY8 1250 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 SLC4A4Q9Y6R1 1079 aa20.32■□□□□ 0.84
DDX28-201ENST00000332395 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 NACAP1Q9BZK3 213 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 SENP2Q9HC62 589 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 GNL3LQ9NVN8 582 aaKnown RBP20.31■□□□□ 0.84
DDX28-201ENST00000332395 MRVI1Q9Y6F6 885 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms