RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 ZNF853P0CG23 659 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 RXRAP19793 462 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 MAGEC2Q9UBF1 373 aaPredicted RBP16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 UBA5Q9GZZ9 404 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 Q6ZUG5 572 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 TMEM87AQ8NBN3 555 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 USP17L12C9JPN9 530 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 USP17L21D6R901 530 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 SLC1A4P43007 532 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 SP4Q02446 784 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 BTDP43251 543 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 ADORA1P30542 326 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 FAM227BQ96M60 508 aa16.66■□□□□ 0.26
SYNGR1-203ENST00000328933 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 MBD3O95983 291 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 CHMLP26374 656 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 ABCC4O15439 1325 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
SYNGR1-203ENST00000328933 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CAVIN1Q6NZI2 390 aaKnown RBP16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CPS1P31327 1500 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CALM1P0DP23 149 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CALM2P0DP24 149 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CALM3P0DP25 149 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 ATP5JP18859 108 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 PAF1Q8N7H5 531 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 UBA7P41226 1012 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 ITPK1Q13572 414 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 CELF1Q92879 486 aaKnown RBP16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 LAMC1P11047 1609 aa16.64■□□□□ 0.25
SYNGR1-203ENST00000328933 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 SNAP23O00161 211 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 IDEP14735 1019 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 PDE6AP16499 860 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 SUPT20HL1Q3ZLR7 823 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 RC3H1Q5TC82 1133 aaKnown RBP16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 KRI1Q8N9T8 703 aaKnown RBP16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
SYNGR1-203ENST00000328933 TFAP4Q01664 338 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 RAD50Q92878 1312 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 NAP1L1P55209 391 aaKnown RBP16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 PDILTQ8N807 584 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 CSRNP1Q96S65 589 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 BSDC1Q9NW68 430 aaPredicted RBP16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
SYNGR1-203ENST00000328933 GRIN3BO60391 1043 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 AOC3Q16853 763 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 APOBRQ0VD83 1088 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 GJB2P29033 226 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 SYCP1Q15431 976 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
SYNGR1-203ENST00000328933 IGKV5-2P06315 115 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms