RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 RNF41Q9H4P4 317 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CABP2Q9NPB3 220 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TSPYL4Q9UJ04 414 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CLNS1AP54105 237 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ETF1P62495 437 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 MYL5Q02045 173 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 SPECC1Q5M775 1068 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ZGPATQ8N5A5 531 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ESYT1Q9BSJ8 1104 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 USP26Q9BXU7 913 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 PRRC2CQ9Y520 2896 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ALS2CLQ60I27 953 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 LARP6Q9BRS8 491 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 VPS18Q9P253 973 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 SHANK1Q9Y566 2161 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ATXN2Q99700 1313 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 VGLL3A8MV65 326 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 SURF6O75683 361 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 POTEJP0CG39 1038 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 PAK2Q13177 524 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ARHGAP18Q8N392 663 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 TSG101Q99816 390 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ADGRL3Q9HAR2 1447 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 CHUKO15111 745 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 STX10O60499 249 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 KIF4AO95239 1232 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 CEBPZQ03701 1054 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 KIF5AQ12840 1032 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 VWA3BQ502W6 1294 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC178Q5BJE1 867 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 GKAP1Q5VSY0 366 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 MSL3Q8N5Y2 521 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 STAG1Q8WVM7 1258 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 PSMD1Q99460 953 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ABCA8O94911 1581 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ITSN1Q15811 1721 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ZNF638Q14966 1978 aaKnown RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 CYP26C1Q6V0L0 522 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 DAAM2Q86T65 1068 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 PLCD3Q8N3E9 789 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 C17orf53Q8N3J3 647 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 FNBP4Q8N3X1 1017 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 NUP133Q8WUM0 1156 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 RUNDC3BQ96NL0 473 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 BAG1Q99933 345 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 GJB2P29033 226 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 PRKAR2BP31323 418 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 PKP1Q13835 747 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 CAMK4Q16566 473 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 RNF187Q5TA31 235 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-201ENST00000317147 ARAP3Q8WWN8 1544 aa5.09□□□□□ -1.59
CNOT1-201ENST00000317147 OTOFQ9HC10 1997 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 ZNF521Q96K83 1311 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 HOXB7P09629 217 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 SNCBQ16143 134 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 NBPF20Q3BBV1 942 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 TSHZ3Q63HK5 1081 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 TRMT2AQ8IZ69 625 aaKnown RBP5.09□□□□□ -1.6
CNOT1-201ENST00000317147 FAM177A1Q8N128 213 aaPredicted RBP5.09□□□□□ -1.6
CNOT1-201ENST00000317147 MTRF1LQ9UGC7 380 aaKnown RBP5.09□□□□□ -1.6
CNOT1-201ENST00000317147 PARP2Q9UGN5 583 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 EXOC6BQ9Y2D4 811 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 USP34Q70CQ2 3546 aa5.09□□□□□ -1.6
CNOT1-201ENST00000317147 IKBKBO14920 756 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ATP2A1O14983 1001 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 RBM6P78332 1123 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 FSIP1Q8NA03 581 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 MLKLQ8NB16 471 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 DNAI2Q9GZS0 605 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 RBSNQ9H1K0 784 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 MED14O60244 1454 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ANKRD26Q9UPS8 1709 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 A0A1W2PQ27 194 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 A0A1W2PQ64 194 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 A0A1W2PQD8 194 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 OAS2P29728 719 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CETN1Q12798 172 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 MCM6Q14566 821 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 RRP36Q96EU6 259 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TRIM6Q9C030 488 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 HNRNPCL1O60812 293 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 MRPS25P82663 173 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 EMBQ6PCB8 327 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TADA2BQ86TJ2 420 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ANKRD7Q92527 254 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TBC1D31Q96DN5 1066 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 FEZ2Q9UHY8 353 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 USP19O94966 1318 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 RFX7Q2KHR2 1363 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CEP104O60308 925 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 WDHD1O75717 1129 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 FOSBP53539 338 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ITIH3Q06033 890 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 NAA25Q14CX7 972 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 MAGEF1Q9HAY2 307 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 STK24Q9Y6E0 443 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ACTN4O43707 911 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms