RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 H0YIN7 160 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 C6orf229H3BNL8 230 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 HAND2P61296 217 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 CLEC17AQ6ZS10 378 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
CALR-201ENST00000316448 LARGE1O95461 756 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 PSMA5P28066 241 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 STYK1Q6J9G0 422 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 NSUN4Q96CB9 384 aaKnown RBP18.74■□□□□ 0.59
CALR-201ENST00000316448 NEK1Q96PY6 1258 aa18.74■□□□□ 0.59
CALR-201ENST00000316448 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
CALR-201ENST00000316448 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 E7EWF7 191 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 MECOMQ03112 1051 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 ZNF804AQ7Z570 1209 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 NBPF3Q9H094 633 aa18.73■□□□□ 0.59
CALR-201ENST00000316448 GSG1L2A8MUP6 293 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 IL1R1P14778 569 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
CALR-201ENST00000316448 DYNLL1P63167 89 aaKnown RBP18.72■□□□□ 0.59
CALR-201ENST00000316448 NUCB2P80303 420 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 MPNDQ8N594 471 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 DDX11L8A8MPP1 907 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 TOB2Q14106 344 aaPredicted RBP18.72■□□□□ 0.59
CALR-201ENST00000316448 KRT32Q14532 448 aa18.72■□□□□ 0.59
CALR-201ENST00000316448 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
CALR-201ENST00000316448 SLX4Q8IY92 1834 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
CALR-201ENST00000316448 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
CALR-201ENST00000316448 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
CALR-201ENST00000316448 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
CALR-201ENST00000316448 APPP05067 770 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 ALX1Q15699 326 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 IFNL3Q8IZI9 196 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 ALDH8A1Q9H2A2 487 aaPredicted RBP18.7■□□□□ 0.58
CALR-201ENST00000316448 TPCN1Q9ULQ1 816 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 SALL1Q9NSC2 1324 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 ST3GAL1Q11201 340 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 LRRC2Q9BYS8 371 aa18.7■□□□□ 0.58
CALR-201ENST00000316448 DTNBO60941 627 aa18.69■□□□□ 0.58
CALR-201ENST00000316448 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
CALR-201ENST00000316448 DPP8Q6V1X1 898 aaPredicted RBP18.69■□□□□ 0.58
CALR-201ENST00000316448 C10orf71Q711Q0 1435 aa18.69■□□□□ 0.58
CALR-201ENST00000316448 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
CALR-201ENST00000316448 LAMA4Q16363 1823 aa18.69■□□□□ 0.58
CALR-201ENST00000316448 MAGEB6P1A0A0J9YX57 407 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 PKP1Q13835 747 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 GSE1Q14687 1217 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 ME3Q16798 604 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 IMMTQ16891 758 aaKnown RBP18.68■□□□□ 0.58
CALR-201ENST00000316448 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 WDR66Q8TBY9 1149 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 INCENPQ9NQS7 918 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 ZNF213O14771 459 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 DOK7Q18PE1 504 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 SDR42E1Q8WUS8 393 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
CALR-201ENST00000316448 CHD4Q14839 1912 aa18.68■□□□□ 0.58
CALR-201ENST00000316448 SMIM22K7EJ46 135 aa18.67■□□□□ 0.58
CALR-201ENST00000316448 KCNA3P22001 575 aa18.67■□□□□ 0.58
CALR-201ENST00000316448 Q6ZUG5 572 aa18.67■□□□□ 0.58
CALR-201ENST00000316448 DHX32Q7L7V1 743 aaKnown RBP18.67■□□□□ 0.58
CALR-201ENST00000316448 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.586e-25■■■■■ 35.5
CALR-201ENST00000316448 CNKSR1Q969H4 720 aa18.67■□□□□ 0.58
CALR-201ENST00000316448 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
CALR-201ENST00000316448 LDHBP07195 334 aaKnown RBP18.66■□□□□ 0.58
CALR-201ENST00000316448 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
CALR-201ENST00000316448 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
CALR-201ENST00000316448 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
CALR-201ENST00000316448 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
CALR-201ENST00000316448 DPEP1P16444 411 aa18.65■□□□□ 0.58
CALR-201ENST00000316448 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
CALR-201ENST00000316448 SPTY2D1Q68D10 685 aaPredicted RBP18.65■□□□□ 0.58
CALR-201ENST00000316448 COA1Q9GZY4 146 aa18.65■□□□□ 0.58
CALR-201ENST00000316448 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
CALR-201ENST00000316448 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
CALR-201ENST00000316448 FAM205AQ6ZU69 1335 aa18.65■□□□□ 0.58
CALR-201ENST00000316448 GNAT2P19087 354 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 ANTXR2P58335 489 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 GTF2IP78347 998 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 MB21D2Q8IYB1 491 aaPredicted RBP18.64■□□□□ 0.58
CALR-201ENST00000316448 NAPBQ9H115 298 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 KCNQ5Q9NR82 932 aa18.64■□□□□ 0.58
CALR-201ENST00000316448 ZMYM6O95789 1325 aa18.64■□□□□ 0.57
CALR-201ENST00000316448 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.57
CALR-201ENST00000316448 DZIP1Q86YF9 867 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms