RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 SETDB2Q96T68 719 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 SCAND2PQ9GZW5 306 aaPredicted RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 ZSCAN16Q9H4T2 348 aaPredicted RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 C4BP0C0L5 1744 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 ZNF804BA4D1E1 1349 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 LETM1O95202 739 aaPredicted RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 UBE4AQ14139 1066 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 MEX3CQ5U5Q3 659 aaKnown RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 NAA16Q6N069 864 aaPredicted RBP23.69■■□□□ 1.38
SSH3-202ENST00000308298 TBC1D10CQ8IV04 446 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 PPP1R9BQ96SB3 815 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 MBD4O95243 580 aa23.68■■□□□ 1.38
SSH3-202ENST00000308298 TPRNQ4KMQ1 711 aa23.68■■□□□ 1.38
SSH3-202ENST00000308298 PATL2C9JE40 543 aaKnown RBP23.67■■□□□ 1.38
SSH3-202ENST00000308298 TIAM2Q8IVF5 1701 aa23.67■■□□□ 1.38
SSH3-202ENST00000308298 KLF18A0A0U1RQI7 1052 aa23.67■■□□□ 1.38
SSH3-202ENST00000308298 NBPF5PQ86XG9 351 aaPredicted RBP23.67■■□□□ 1.38
SSH3-202ENST00000308298 HSPA1LP34931 641 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 SPATA32Q96LK8 384 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 GNL3LQ9NVN8 582 aaKnown RBP23.66■■□□□ 1.38
SSH3-202ENST00000308298 MINPP1Q9UNW1 487 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 IFNL3Q8IZI9 196 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 CELF1Q92879 486 aaKnown RBP23.66■■□□□ 1.38
SSH3-202ENST00000308298 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 ARMT1Q9H993 441 aa23.66■■□□□ 1.38
SSH3-202ENST00000308298 EPB41L4AQ9HCS5 686 aaPredicted RBP23.66■■□□□ 1.38
SSH3-202ENST00000308298 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 GOLGA8BA8MQT2 603 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 KLHL34Q8N239 644 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 NAPBQ9H115 298 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 LRP2BPQ9P2M1 347 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 TFIP11Q9UBB9 837 aaKnown RBP23.65■■□□□ 1.38
SSH3-202ENST00000308298 PNPLA7Q6ZV29 1317 aa23.65■■□□□ 1.38
SSH3-202ENST00000308298 DHX16O60231 1041 aaKnown RBP23.64■■□□□ 1.38
SSH3-202ENST00000308298 GNAT2P19087 354 aa23.64■■□□□ 1.38
SSH3-202ENST00000308298 LEO1Q8WVC0 666 aaPredicted RBP23.64■■□□□ 1.38
SSH3-202ENST00000308298 ARHGEF1Q92888 912 aaKnown RBP23.64■■□□□ 1.38
SSH3-202ENST00000308298 TRIM44Q96DX7 344 aaPredicted RBP23.64■■□□□ 1.38
SSH3-202ENST00000308298 HPS5Q9UPZ3 1129 aa23.64■■□□□ 1.38
SSH3-202ENST00000308298 MYH13Q9UKX3 1938 aa23.64■■□□□ 1.38
SSH3-202ENST00000308298 AFF2P51816 1311 aa23.64■■□□□ 1.38
SSH3-202ENST00000308298 GYG1P46976 350 aa23.64■■□□□ 1.37
SSH3-202ENST00000308298 CAVIN4Q5BKX8 364 aa23.63■■□□□ 1.37
SSH3-202ENST00000308298 TPTE2Q6XPS3 522 aa23.63■■□□□ 1.37
SSH3-202ENST00000308298 CYB5R4Q7L1T6 521 aa23.63■■□□□ 1.37
SSH3-202ENST00000308298 AMIGO3Q86WK7 504 aa23.63■■□□□ 1.37
SSH3-202ENST00000308298 DENND2AQ9ULE3 1009 aa23.63■■□□□ 1.37
SSH3-202ENST00000308298 ANGEL1Q9UNK9 670 aaKnown RBP23.63■■□□□ 1.37
SSH3-202ENST00000308298 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
SSH3-202ENST00000308298 COL1A1P02452 1464 aaPredicted RBP23.63■■□□□ 1.37
SSH3-202ENST00000308298 GSG1L2A8MUP6 293 aa23.62■■□□□ 1.37
SSH3-202ENST00000308298 LCORLQ8N3X6 602 aa23.62■■□□□ 1.37
SSH3-202ENST00000308298 FDPSP14324 419 aaKnown RBP23.62■■□□□ 1.37
SSH3-202ENST00000308298 FOSBP53539 338 aa23.62■■□□□ 1.37
SSH3-202ENST00000308298 RPS8P62241 208 aaKnown RBP23.62■■□□□ 1.37
SSH3-202ENST00000308298 CFAP45Q9UL16 551 aa23.62■■□□□ 1.37
SSH3-202ENST00000308298 NEDD4P46934 1319 aa23.62■■□□□ 1.37
SSH3-202ENST00000308298 B4E1Z4 1266 aa23.61■■□□□ 1.37
SSH3-202ENST00000308298 SH2B2O14492 632 aaPredicted RBP23.61■■□□□ 1.37
SSH3-202ENST00000308298 ONECUT3O60422 494 aaPredicted RBP23.61■■□□□ 1.37
SSH3-202ENST00000308298 NACAP1Q9BZK3 213 aa23.61■■□□□ 1.37
SSH3-202ENST00000308298 CACNA1SQ13698 1873 aa23.61■■□□□ 1.37
SSH3-202ENST00000308298 WTIPA6NIX2 430 aaPredicted RBP23.6■■□□□ 1.37
SSH3-202ENST00000308298 RNF214Q8ND24 703 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 TMEM87BQ96K49 555 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 SLC4A4Q9Y6R1 1079 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 TNRC6CQ9HCJ0 1690 aaKnown RBP23.6■■□□□ 1.37
SSH3-202ENST00000308298 GOLGA6L4A6NEF3 574 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 VPS37DQ86XT2 251 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 NKX2-3Q8TAU0 364 aa23.6■■□□□ 1.37
SSH3-202ENST00000308298 PRKAB2O43741 272 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 PPFIA3O75145 1194 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 CYP7A1P22680 504 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 FAM84BQ96KN1 310 aaPredicted RBP23.59■■□□□ 1.37
SSH3-202ENST00000308298 ABCF2Q9UG63 623 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 TRPC5Q9UL62 973 aaPredicted RBP23.59■■□□□ 1.37
SSH3-202ENST00000308298 CPLX1O14810 134 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 RFC4P35249 363 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 TDO2P48775 406 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 MIGA1Q8NAN2 632 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 CNNM2Q9H8M5 875 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 RRAGDQ9NQL2 400 aaPredicted RBP23.59■■□□□ 1.37
SSH3-202ENST00000308298 RAI14Q9P0K7 980 aa23.59■■□□□ 1.37
SSH3-202ENST00000308298 CTDSPL2Q05D32 466 aa23.58■■□□□ 1.37
SSH3-202ENST00000308298 TRAPPC3LQ5T215 181 aa23.58■■□□□ 1.37
SSH3-202ENST00000308298 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.37
SSH3-202ENST00000308298 PDLIM2Q96JY6 352 aa23.58■■□□□ 1.37
SSH3-202ENST00000308298 ANKRD2Q9GZV1 360 aa23.58■■□□□ 1.37
SSH3-202ENST00000308298 LIG1P18858 919 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 ADD1P35611 737 aaKnown RBP23.57■■□□□ 1.36
SSH3-202ENST00000308298 AKNAD1Q5T1N1 836 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 ATL3Q6DD88 541 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 RAB11FIP4Q86YS3 637 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 SEMA3EO15041 775 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 GUCY1B3Q02153 619 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 FBXO33Q7Z6M2 555 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 CCDC24Q8N4L8 307 aa23.57■■□□□ 1.36
SSH3-202ENST00000308298 ORC3Q9UBD5 711 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms