RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PRC1O43663 620 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 APPP05067 770 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 FAM84BQ96KN1 310 aaPredicted RBP27.35■■□□□ 1.97
RAB40B-201ENST00000269347 CACNA1SQ13698 1873 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 SMIM22K7EJ46 135 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 NFIXQ14938 502 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 MIGA1Q8NAN2 632 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 ZNF384Q8TF68 577 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 AIDAQ96BJ3 306 aa27.35■■□□□ 1.97
RAB40B-201ENST00000269347 NAP1L2Q9ULW6 460 aaPredicted RBP27.35■■□□□ 1.97
RAB40B-201ENST00000269347 SALL1Q9NSC2 1324 aa27.34■■□□□ 1.97
RAB40B-201ENST00000269347 BCL11BQ9C0K0 894 aaPredicted RBP27.34■■□□□ 1.97
RAB40B-201ENST00000269347 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
RAB40B-201ENST00000269347 CHD4Q14839 1912 aa27.34■■□□□ 1.97
RAB40B-201ENST00000269347 NEDD4P46934 1319 aa27.34■■□□□ 1.97
RAB40B-201ENST00000269347 RPS8P62241 208 aaKnown RBP27.33■■□□□ 1.97
RAB40B-201ENST00000269347 MAP3K12Q12852 859 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 NLRP3Q96P20 1036 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 RBSNQ9H1K0 784 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 PTPDC1A2A3K4 754 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 GSG1L2A8MUP6 293 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 TRAPPC3LQ5T215 181 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 TXNRD3Q86VQ6 643 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
RAB40B-201ENST00000269347 MBD3O95983 291 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 RFC4P35249 363 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 EVCP57679 992 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 TTC6Q86TZ1 520 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 FDPSP14324 419 aaKnown RBP27.32■■□□□ 1.96
RAB40B-201ENST00000269347 CTDSPL2Q05D32 466 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 UBE4AQ14139 1066 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 IFNL3Q8IZI9 196 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 FBXL16Q8N461 479 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 NCOA7Q8NI08 942 aa27.32■■□□□ 1.96
RAB40B-201ENST00000269347 TPTE2Q6XPS3 522 aa27.31■■□□□ 1.96
RAB40B-201ENST00000269347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.31■■□□□ 1.96
RAB40B-201ENST00000269347 ZNF274Q96GC6 653 aaPredicted RBP27.31■■□□□ 1.96
RAB40B-201ENST00000269347 TFCP2L1Q9NZI6 479 aa27.31■■□□□ 1.96
RAB40B-201ENST00000269347 ABCF2Q9UG63 623 aa27.31■■□□□ 1.96
RAB40B-201ENST00000269347 MCM5P33992 734 aa27.3■■□□□ 1.96
RAB40B-201ENST00000269347 LRP2BPQ9P2M1 347 aa27.3■■□□□ 1.96
RAB40B-201ENST00000269347 TFIP11Q9UBB9 837 aaKnown RBP27.3■■□□□ 1.96
RAB40B-201ENST00000269347 ISY1Q9ULR0 285 aaKnown RBP27.3■■□□□ 1.96
RAB40B-201ENST00000269347 B4E1Z4 1266 aa27.29■■□□□ 1.96
RAB40B-201ENST00000269347 PATL2C9JE40 543 aaKnown RBP27.29■■□□□ 1.96
RAB40B-201ENST00000269347 RESTQ13127 1097 aa27.29■■□□□ 1.96
RAB40B-201ENST00000269347 TRIM37O94972 964 aa27.29■■□□□ 1.96
RAB40B-201ENST00000269347 PDCP20941 246 aa27.29■■□□□ 1.96
RAB40B-201ENST00000269347 KLF18A0A0U1RQI7 1052 aa27.28■■□□□ 1.96
RAB40B-201ENST00000269347 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
RAB40B-201ENST00000269347 MYH15Q9Y2K3 1946 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 FBXO33Q7Z6M2 555 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 STK11IPQ8N1F8 1099 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 PROM2Q8N271 834 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 LLPHQ9BRT6 129 aaKnown RBP27.27■■□□□ 1.96
RAB40B-201ENST00000269347 ATP6V1DQ9Y5K8 247 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 IRS2Q9Y4H2 1338 aa27.27■■□□□ 1.96
RAB40B-201ENST00000269347 ALX1Q15699 326 aa27.26■■□□□ 1.96
RAB40B-201ENST00000269347 LRSAM1Q6UWE0 723 aa27.26■■□□□ 1.96
RAB40B-201ENST00000269347 JAG2Q9Y219 1238 aa27.26■■□□□ 1.96
RAB40B-201ENST00000269347 BAZ2AQ9UIF9 1905 aaKnown RBP27.26■■□□□ 1.95
RAB40B-201ENST00000269347 CYP7A1P22680 504 aa27.26■■□□□ 1.95
RAB40B-201ENST00000269347 UBE2HP62256 183 aa27.26■■□□□ 1.95
RAB40B-201ENST00000269347 GUCY1B3Q02153 619 aa27.26■■□□□ 1.95
RAB40B-201ENST00000269347 RALYLQ86SE5 291 aaKnown RBP27.26■■□□□ 1.95
RAB40B-201ENST00000269347 SDR42E1Q8WUS8 393 aa27.26■■□□□ 1.95
RAB40B-201ENST00000269347 RXRAP19793 462 aa27.25■■□□□ 1.95
RAB40B-201ENST00000269347 GJB4Q9NTQ9 266 aa27.25■■□□□ 1.95
RAB40B-201ENST00000269347 SLC4A4Q9Y6R1 1079 aa27.25■■□□□ 1.95
RAB40B-201ENST00000269347 GYS1P13807 737 aa27.25■■□□□ 1.95
RAB40B-201ENST00000269347 DYNLL1P63167 89 aaKnown RBP27.25■■□□□ 1.95
RAB40B-201ENST00000269347 TIAM2Q8IVF5 1701 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 OTUD7BQ6GQQ9 843 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 FTOQ9C0B1 505 aaKnown RBP eCLIP27.24■■□□□ 1.95
RAB40B-201ENST00000269347 EVX2Q03828 476 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 PRR5LQ6MZQ0 368 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 NAPBQ9H115 298 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 RAI14Q9P0K7 980 aa27.24■■□□□ 1.95
RAB40B-201ENST00000269347 PNPLA7Q6ZV29 1317 aa27.23■■□□□ 1.95
RAB40B-201ENST00000269347 GOLGB1Q14789 3259 aaKnown RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 CARMIL3Q8ND23 1372 aa27.23■■□□□ 1.95
RAB40B-201ENST00000269347 GOLGA8BA8MQT2 603 aa27.23■■□□□ 1.95
RAB40B-201ENST00000269347 SH2B2O14492 632 aaPredicted RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 ADD1P35611 737 aaKnown RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 FAM184AQ8NB25 1140 aa27.23■■□□□ 1.95
RAB40B-201ENST00000269347 GPR101Q96P66 508 aaPredicted RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 RIOK1Q9BRS2 568 aaKnown RBP27.23■■□□□ 1.95
RAB40B-201ENST00000269347 KRT27Q7Z3Y8 459 aa27.22■■□□□ 1.95
RAB40B-201ENST00000269347 IGDCC4Q8TDY8 1250 aa27.22■■□□□ 1.95
RAB40B-201ENST00000269347 CAVIN4Q5BKX8 364 aa27.22■■□□□ 1.95
RAB40B-201ENST00000269347 ZSWIM5Q9P217 1185 aa27.22■■□□□ 1.95
RAB40B-201ENST00000269347 ZMYM6O95789 1325 aa27.22■■□□□ 1.95
RAB40B-201ENST00000269347 NASPP49321 788 aaPredicted RBP27.21■■□□□ 1.95
RAB40B-201ENST00000269347 VPS37DQ86XT2 251 aa27.21■■□□□ 1.95
RAB40B-201ENST00000269347 KRT85P78386 507 aa27.21■■□□□ 1.95
RAB40B-201ENST00000269347 MYL10Q9BUA6 226 aa27.21■■□□□ 1.95
RAB40B-201ENST00000269347 H3BQV1 296 aa27.2■■□□□ 1.94
RAB40B-201ENST00000269347 IFFO2Q5TF58 517 aa27.2■■□□□ 1.94
RAB40B-201ENST00000269347 CNBD1Q8NA66 436 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms