RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 USP27XA6NNY8 438 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 NF2P35240 595 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 NLRP5P59047 1200 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 NAA15Q9BXJ9 866 aaKnown RBP18.42■□□□□ 0.54
SREBF1-201ENST00000261646 NDUFA8P51970 172 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC91Q7Z6B0 441 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 CHD1O14646 1710 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 PTCH1Q13635 1447 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 RNF113AO15541 343 aaKnown RBP18.41■□□□□ 0.54
SREBF1-201ENST00000261646 MYO1BO43795 1136 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 BRD3Q15059 726 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC122Q5T0U0 273 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 SEC62Q99442 399 aaKnown RBP18.41■□□□□ 0.54
SREBF1-201ENST00000261646 PDE11AQ9HCR9 933 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 MORC2Q9Y6X9 1032 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-201ENST00000261646 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 MAP3K12Q12852 859 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 CTCFLQ8NI51 663 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-201ENST00000261646 UNC13BO14795 1591 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 UBA7P41226 1012 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 KIF5AQ12840 1032 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 PNOCQ13519 176 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 MYSM1Q5VVJ2 828 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 SPECC1LQ69YQ0 1117 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 VPS16Q9H269 839 aa18.41■□□□□ 0.54
SREBF1-201ENST00000261646 POLR2DO15514 142 aaKnown RBP18.4■□□□□ 0.54
SREBF1-201ENST00000261646 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-201ENST00000261646 MFSD6Q6ZSS7 791 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 FANCLQ9NW38 375 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 PFKFB1P16118 471 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 UBXN1Q04323 297 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 NDUFAB1O14561 156 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 ZFYVE27Q5T4F4 411 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 DYDC1Q8WWB3 177 aa18.4■□□□□ 0.54
SREBF1-201ENST00000261646 LUC7L2Q9Y383 392 aaKnown RBP18.4■□□□□ 0.54
SREBF1-201ENST00000261646 GBP6Q6ZN66 633 aa18.39■□□□□ 0.54
SREBF1-201ENST00000261646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.39■□□□□ 0.54
SREBF1-201ENST00000261646 ST7Q9NRC1 585 aa18.39■□□□□ 0.54
SREBF1-201ENST00000261646 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.54
SREBF1-201ENST00000261646 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 ZCCHC17Q9NP64 241 aaKnown RBP18.39■□□□□ 0.53
SREBF1-201ENST00000261646 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-201ENST00000261646 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
SREBF1-201ENST00000261646 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 GYS2P54840 703 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 KRT83P78385 493 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 RTN1Q16799 776 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 ANKRD7Q92527 254 aa18.39■□□□□ 0.53
SREBF1-201ENST00000261646 INPP5BP32019 993 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 GBP2P32456 591 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 LONRF2Q1L5Z9 754 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 TNNI3KQ59H18 835 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 SLC9C2Q5TAH2 1124 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 IQCA1Q86XH1 822 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 FPGT-TNNI3KV9GXZ4 949 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 GOLGA6CA6NDK9 693 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 TACC1O75410 805 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 GOLGA6DP0CG33 693 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 WTAPQ15007 396 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 GOLGA6AQ9NYA3 693 aa18.38■□□□□ 0.53
SREBF1-201ENST00000261646 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 IL15P40933 162 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 GNL3LQ9NVN8 582 aaKnown RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 SEPT11Q9NVA2 429 aaKnown RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 TTF2Q9UNY4 1162 aaKnown RBP18.38■□□□□ 0.53
SREBF1-201ENST00000261646 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 IDEP14735 1019 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-201ENST00000261646 SCRN1Q12765 414 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 MLKLQ8NB16 471 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 IP6K1Q92551 441 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 RABGGTAQ92696 567 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 CCDC42Q96M95 316 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 CCDC194A0A1B0GVG4 234 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
SREBF1-201ENST00000261646 E9PCH4 1651 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 TMCO5BA8MYB1 307 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 EIF4A1P60842 406 aaKnown RBP18.37■□□□□ 0.53
SREBF1-201ENST00000261646 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 RNF41Q9H4P4 317 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-201ENST00000261646 KIF1BO60333 1816 aa18.37■□□□□ 0.53
SREBF1-201ENST00000261646 KRT9P35527 623 aa18.36■□□□□ 0.53
SREBF1-201ENST00000261646 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-201ENST00000261646 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms