RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 SPATA31C2B4DYI2 1134 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 LCE2BO14633 110 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 ENC1O14682 589 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 KCNQ2O43526 872 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 ATP4AP20648 1035 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 MFSD3Q96ES6 412 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 CAAP1Q9H8G2 361 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 ZMYM5Q9UJ78 669 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 SMARCA2P51531 1590 aa6.68□□□□□ -1.34
TCN1-201ENST00000257264 CREB3O43889 395 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 ZIC2O95409 532 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 ALDH1A1P00352 501 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 PMLP29590 882 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 EPHB1P54762 984 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 TM4SF20Q53R12 229 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 LSRQ86X29 649 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 DDX42Q86XP3 938 aaKnown RBP eCLIP6.67□□□□□ -1.34
TCN1-201ENST00000257264 WDR75Q8IWA0 830 aaKnown RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 JARID2Q92833 1246 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 NINJ1Q92982 152 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 ZNF775Q96BV0 537 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 MCM8Q9UJA3 840 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
TCN1-201ENST00000257264 CCDC88BA6NC98 1476 aa6.67□□□□□ -1.34
TCN1-201ENST00000257264 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
TCN1-201ENST00000257264 FAM221AA4D161 298 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 SOX5P35711 763 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 STAT3P40763 770 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 TMEM67Q5HYA8 995 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 NIM1KQ8IY84 436 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 TSR2Q969E8 191 aaKnown RBP6.66□□□□□ -1.34
TCN1-201ENST00000257264 OSMRQ99650 979 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 BRMS1Q9HCU9 246 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 SEC31BQ9NQW1 1179 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 GJA3Q9Y6H8 435 aa6.66□□□□□ -1.34
TCN1-201ENST00000257264 ALDH1L1O75891 902 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 POU3F3P20264 500 aaPredicted RBP6.65□□□□□ -1.34
TCN1-201ENST00000257264 ITPKAP23677 461 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 NFKB2Q00653 900 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 UBE4AQ14139 1066 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 NFE2Q16621 373 aaPredicted RBP6.65□□□□□ -1.34
TCN1-201ENST00000257264 TSHZ1Q6ZSZ6 1077 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 REC114Q7Z4M0 266 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 THNSL2Q86YJ6 484 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 FAM178BQ8IXR5 827 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 RAVER1Q8IY67 606 aaKnown RBP6.65□□□□□ -1.34
TCN1-201ENST00000257264 C19orf47Q8N9M1 422 aaKnown RBP6.65□□□□□ -1.34
TCN1-201ENST00000257264 UBE2Q2Q8WVN8 375 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 ZKSCAN3Q9BRR0 538 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 KLF16Q9BXK1 252 aaPredicted RBP6.65□□□□□ -1.34
TCN1-201ENST00000257264 SAMM50Q9Y512 469 aa6.65□□□□□ -1.34
TCN1-201ENST00000257264 A0A1W2PNR3 127 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 PLIN1O60240 522 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 CAND2O75155 1236 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 CILPO75339 1184 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 PAGE1O75459 146 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 SASH3O75995 380 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 BPNT1O95861 308 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 WDR4P57081 412 aaKnown RBP6.65□□□□□ -1.35
TCN1-201ENST00000257264 CLCQ05315 142 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 OS9Q13438 667 aaPredicted RBP6.65□□□□□ -1.35
TCN1-201ENST00000257264 LONRF2Q1L5Z9 754 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 MAP9Q49MG5 647 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 RPS26P11Q5JNZ5 115 aaPredicted RBP6.65□□□□□ -1.35
TCN1-201ENST00000257264 WDR44Q5JSH3 913 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 PERM1Q5SV97 790 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 NCAPG2Q86XI2 1143 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 SLC26A8Q96RN1 970 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 FAM126AQ9BYI3 521 aaPredicted RBP6.65□□□□□ -1.35
TCN1-201ENST00000257264 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.35
TCN1-201ENST00000257264 TNIKQ9UKE5 1360 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 ABCC8Q09428 1581 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 HMGB1P1B2RPK0 211 aaPredicted RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 KHNYNO15037 678 aaKnown RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 TSPAN6O43657 245 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 GNALP38405 381 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 GRIA4P48058 902 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 POU4F2Q12837 409 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 KANK3Q6NY19 840 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 C6orf15Q6UXA7 325 aaPredicted RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 INSM2Q96T92 566 aaPredicted RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 UBA5Q9GZZ9 404 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 BRD7Q9NPI1 651 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 GPN3Q9UHW5 284 aaPredicted RBP6.64□□□□□ -1.35
TCN1-201ENST00000257264 PCDHB5Q9Y5E4 795 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 COMMD10Q9Y6G5 202 aa6.64□□□□□ -1.35
TCN1-201ENST00000257264 CCDC163A0A0D9SF12 145 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 MMP20O60882 483 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 MSX1P28360 303 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 HDAC1Q13547 482 aaPredicted RBP6.63□□□□□ -1.35
TCN1-201ENST00000257264 FAM50AQ14320 339 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms