RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NBPF9Q3BBW0 867 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 TRIM5Q9C035 493 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 DCCP43146 1447 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 DRC7Q8IY82 874 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 CXorf56Q9H5V9 222 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 TRIM66O15016 1216 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 FDPSP14324 419 aaKnown RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 ZAP70P43403 619 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 PUS7LQ9H0K6 701 aaKnown RBP13.12□□□□□ -0.31
PDE6B-201ENST00000255622 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
PDE6B-201ENST00000255622 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
PDE6B-201ENST00000255622 IL2RBP14784 551 aa13.11□□□□□ -0.31
PDE6B-201ENST00000255622 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
PDE6B-201ENST00000255622 CARMIL3Q8ND23 1372 aa13.11□□□□□ -0.31
PDE6B-201ENST00000255622 CIAO1O76071 339 aa13.11□□□□□ -0.31
PDE6B-201ENST00000255622 ZNF75DP51815 510 aa13.11□□□□□ -0.31
PDE6B-201ENST00000255622 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
PDE6B-201ENST00000255622 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
PDE6B-201ENST00000255622 GPTP24298 496 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 DENND2AQ9ULE3 1009 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 FGAP02671 866 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 ME1P48163 572 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
PDE6B-201ENST00000255622 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 RCOR1Q9UKL0 485 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
PDE6B-201ENST00000255622 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
PDE6B-201ENST00000255622 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
PDE6B-201ENST00000255622 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
PDE6B-201ENST00000255622 POLR3DP05423 398 aaPredicted RBP13.08□□□□□ -0.31
PDE6B-201ENST00000255622 HLFQ16534 295 aa13.08□□□□□ -0.31
PDE6B-201ENST00000255622 OTUD6BQ8N6M0 293 aa13.08□□□□□ -0.31
PDE6B-201ENST00000255622 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.31
PDE6B-201ENST00000255622 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 PRC1O43663 620 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDE6B-201ENST00000255622 IQCB1Q15051 598 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 ANTXR2P58335 489 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 ARID5BQ14865 1188 aa13.08□□□□□ -0.32
PDE6B-201ENST00000255622 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
PDE6B-201ENST00000255622 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
PDE6B-201ENST00000255622 ZSCAN25Q6NSZ9 544 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 BORCS6Q96GS4 357 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 GREM2Q9H772 168 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 RIC1Q4ADV7 1423 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 MCAMP43121 646 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 EVA1CP58658 441 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 CCDC73Q6ZRK6 1079 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 PIGBQ92521 554 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
PDE6B-201ENST00000255622 GPAA1O43292 621 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 TPM3P06753 285 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 CASQ1P31415 396 aa13.07□□□□□ -0.32
PDE6B-201ENST00000255622 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
PDE6B-201ENST00000255622 C16orf45Q96MC5 204 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms