RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CCDC87Q9NVE4 849 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 AHDC1Q5TGY3 1603 aaPredicted RBP22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 A0A0G2JS52 829 aa22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 CRKLP46109 303 aaKnown RBP22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 ME1P48163 572 aa22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 TDRD7Q8NHU6 1098 aaKnown RBP22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 ACSBG1Q96GR2 724 aa22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 AK7Q96M32 723 aa22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 MYH14Q7Z406 1995 aaKnown RBP22.83■■□□□ 1.25
CDC42EP1-201ENST00000249014 TRDNQ13061 729 aa22.83■■□□□ 1.24
CDC42EP1-201ENST00000249014 SPATA5Q8NB90 893 aa22.83■■□□□ 1.24
CDC42EP1-201ENST00000249014 STRBPQ96SI9 672 aaKnown RBP22.83■■□□□ 1.24
CDC42EP1-201ENST00000249014 RTEL1Q9NZ71 1219 aa22.83■■□□□ 1.24
CDC42EP1-201ENST00000249014 CPLX1O14810 134 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 ATP6V1AP38606 617 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 RASGRF1Q13972 1273 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 CCDC73Q6ZRK6 1079 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 PCDHA7Q9UN72 937 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 ANGEL1Q9UNK9 670 aaKnown RBP22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 POLR3DP05423 398 aaPredicted RBP22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 FAM160A1Q05DH4 1040 aa22.82■■□□□ 1.24
CDC42EP1-201ENST00000249014 SPATA31A1Q5TZJ5 1347 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 B4E1Z4 1266 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 SLC5A1P13866 664 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 FSIP1Q8NA03 581 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 AIDAQ96BJ3 306 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 UTP14AQ9BVJ6 771 aaKnown RBP22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 SENP2Q9HC62 589 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 CLIC4Q9Y696 253 aa22.81■■□□□ 1.24
CDC42EP1-201ENST00000249014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 SH2B2O14492 632 aaPredicted RBP22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 CTAGE5O15320 804 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 CAMTA2O94983 1202 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 ITPK1Q13572 414 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 DDB1Q16531 1140 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 LINC00301Q8NCQ3 95 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 CHD4Q14839 1912 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 RREB1Q92766 1687 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 NEDD4P46934 1319 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 NRAPQ86VF7 1730 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 C11orf57Q6ZUT1 292 aaPredicted RBP22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 MAGEB6Q8N7X4 407 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 MPHOSPH8Q99549 860 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 EPB41L4AQ9HCS5 686 aaPredicted RBP22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 INCENPQ9NQS7 918 aa22.8■■□□□ 1.24
CDC42EP1-201ENST00000249014 LOC102724428A0A0B4J2F2 783 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 ADAMTS2O95450 1211 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 PRKCSHP14314 528 aaPredicted RBP22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 RXRAP19793 462 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 SIK1P57059 783 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 PLA2G4DQ86XP0 818 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 SPTLC3Q9NUV7 552 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 PYCARDQ9ULZ3 195 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 ZMYM6O95789 1325 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 KINO60870 393 aaKnown RBP22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 IQCB1Q15051 598 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 ADALQ6DHV7 355 aa22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
CDC42EP1-201ENST00000249014 ECM29Q5VYK3 1845 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 A0A087WWV3 80 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 UQCRHLA0A096LP55 91 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 GOLGA6L6A8MZA4 724 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 TPM3P06753 285 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 UQCRHP07919 91 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 MYSM1Q5VVJ2 828 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 KIAA1524Q8TCG1 905 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 AIFM3Q96NN9 605 aa22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
CDC42EP1-201ENST00000249014 CAVIN2O95810 425 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 PTGS1P23219 599 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 ZNF75DP51815 510 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 ALX1Q15699 326 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 APOA5Q6Q788 366 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 MRPS27Q92552 414 aaKnown RBP22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 TRIM5Q9C035 493 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 POLR3EQ9NVU0 708 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 COL4A1P02462 1669 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 PATL2C9JE40 543 aaKnown RBP22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 MBD4O95243 580 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 CDC27P30260 824 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 METAP2P50579 478 aaKnown RBP eCLIP22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 KIF23Q02241 960 aaPredicted RBP22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 MAP3K12Q12852 859 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 BRAPQ7Z569 592 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 IFNL3Q8IZI9 196 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 TACC3Q9Y6A5 838 aa22.77■■□□□ 1.24
CDC42EP1-201ENST00000249014 LAMB2P55268 1798 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 A0A1B0GVL5 298 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 NTSR2O95665 410 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 STK38Q15208 465 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 STX1AQ16623 288 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 DNTTIP2Q5QJE6 756 aaKnown RBP22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 ERCC4Q92889 916 aaPredicted RBP22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 ARMT1Q9H993 441 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 A0A1W2PQ27 194 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 A0A1W2PQ64 194 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 A0A1W2PQD8 194 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms