RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 C6orf229H3BNL8 230 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 IL1R1P14778 569 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 LCORLQ8N3X6 602 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 MIGA1Q8NAN2 632 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
HDHD3-201ENST00000238379 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDHD3-201ENST00000238379 NSUN4Q96CB9 384 aaKnown RBP18.1■□□□□ 0.49
HDHD3-201ENST00000238379 INTS4Q96HW7 963 aaKnown RBP18.1■□□□□ 0.49
HDHD3-201ENST00000238379 LARP6Q9BRS8 491 aaKnown RBP18.1■□□□□ 0.49
HDHD3-201ENST00000238379 CWC22Q9HCG8 908 aaKnown RBP18.1■□□□□ 0.49
HDHD3-201ENST00000238379 APPP05067 770 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
HDHD3-201ENST00000238379 GNAT2P19087 354 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 PRDX5P30044 214 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 MECOMQ03112 1051 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
HDHD3-201ENST00000238379 MPNDQ8N594 471 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 TCEANC2Q96MN5 208 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 CHRNA5P30532 468 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 HAND2P61296 217 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
HDHD3-201ENST00000238379 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
HDHD3-201ENST00000238379 ZNF213O14771 459 aa18.08■□□□□ 0.48
HDHD3-201ENST00000238379 PRKAB2O43741 272 aa18.08■□□□□ 0.48
HDHD3-201ENST00000238379 IGSF3O75054 1194 aa18.08■□□□□ 0.48
HDHD3-201ENST00000238379 TOB2Q14106 344 aaPredicted RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 ANKRD1Q15327 319 aa18.08■□□□□ 0.48
HDHD3-201ENST00000238379 SPTY2D1Q68D10 685 aaPredicted RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 TMED8Q6PL24 325 aaPredicted RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 DHX32Q7L7V1 743 aaKnown RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 IFNL3Q8IZI9 196 aa18.08■□□□□ 0.48
HDHD3-201ENST00000238379 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 RIOK1Q9BRS2 568 aaKnown RBP18.08■□□□□ 0.48
HDHD3-201ENST00000238379 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 LARGE1O95461 756 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
HDHD3-201ENST00000238379 ILDR1Q86SU0 546 aaPredicted RBP18.07■□□□□ 0.48
HDHD3-201ENST00000238379 NBPF3Q9H094 633 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 DPP8Q6V1X1 898 aaPredicted RBP18.07■□□□□ 0.48
HDHD3-201ENST00000238379 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 C10orf71Q711Q0 1435 aa18.07■□□□□ 0.48
HDHD3-201ENST00000238379 NBR1Q14596 966 aa18.06■□□□□ 0.48
HDHD3-201ENST00000238379 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
HDHD3-201ENST00000238379 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
HDHD3-201ENST00000238379 SH2B1Q9NRF2 756 aaPredicted RBP18.06■□□□□ 0.48
HDHD3-201ENST00000238379 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
HDHD3-201ENST00000238379 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 ME3Q16798 604 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 NAPBQ9H115 298 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 LDHBP07195 334 aaKnown RBP18.05■□□□□ 0.48
HDHD3-201ENST00000238379 DYNLL1P63167 89 aaKnown RBP18.05■□□□□ 0.48
HDHD3-201ENST00000238379 GRIK5Q16478 980 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 Q6ZUG5 572 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 ZC3H12CQ9C0D7 883 aaKnown RBP18.05■□□□□ 0.48
HDHD3-201ENST00000238379 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
HDHD3-201ENST00000238379 SLX4Q8IY92 1834 aa18.04■□□□□ 0.48
HDHD3-201ENST00000238379 MAST2Q6P0Q8 1798 aa18.04■□□□□ 0.48
HDHD3-201ENST00000238379 RIMBP2O15034 1052 aa18.04■□□□□ 0.48
HDHD3-201ENST00000238379 DZIP1Q86YF9 867 aaKnown RBP18.04■□□□□ 0.48
HDHD3-201ENST00000238379 TBC1D10CQ8IV04 446 aa18.04■□□□□ 0.48
HDHD3-201ENST00000238379 ST3GAL1Q11201 340 aa18.03■□□□□ 0.48
HDHD3-201ENST00000238379 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
HDHD3-201ENST00000238379 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
HDHD3-201ENST00000238379 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
HDHD3-201ENST00000238379 FBXL16Q8N461 479 aa18.02■□□□□ 0.48
HDHD3-201ENST00000238379 NCOA7Q8NI08 942 aa18.02■□□□□ 0.48
HDHD3-201ENST00000238379 SDR42E1Q8WUS8 393 aa18.02■□□□□ 0.48
HDHD3-201ENST00000238379 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.48
HDHD3-201ENST00000238379 TDO2P48775 406 aa18.02■□□□□ 0.47
HDHD3-201ENST00000238379 NUCB2P80303 420 aa18.02■□□□□ 0.47
HDHD3-201ENST00000238379 BRF1Q92994 677 aa18.02■□□□□ 0.47
HDHD3-201ENST00000238379 PKP1Q13835 747 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 CCDC83Q8IWF9 413 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 NECAB1Q8N987 351 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 TNPO1Q92973 898 aaKnown RBP18.01■□□□□ 0.47
HDHD3-201ENST00000238379 EYA3Q99504 573 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
HDHD3-201ENST00000238379 AATFQ9NY61 560 aaKnown RBP eCLIP18.01■□□□□ 0.47
HDHD3-201ENST00000238379 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
HDHD3-201ENST00000238379 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
HDHD3-201ENST00000238379 CHD4Q14839 1912 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 MCM5P33992 734 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 GSTO1P78417 241 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 CHST3Q7LGC8 479 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 RALYLQ86SE5 291 aaKnown RBP18■□□□□ 0.47
HDHD3-201ENST00000238379 SNED1Q8TER0 1413 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 ANTXR2P58335 489 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 GTF2IP78347 998 aa18■□□□□ 0.47
HDHD3-201ENST00000238379 FGD1P98174 961 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms