RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 STX17P56962 302 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 ZNF569Q5MCW4 686 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 FAM184BQ9ULE4 1060 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 STK10O94804 968 aaKnown RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 DNAJC25Q9H1X3 360 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 SMTNP53814 917 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 HSPA1LP34931 641 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 DDB1Q16531 1140 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 CCDC186Q7Z3E2 898 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 GJA3Q9Y6H8 435 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 EBAG9O00559 213 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 ITIH3Q06033 890 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 KARSQ15046 597 aaKnown RBP16.68■□□□□ 0.26
UBR5-201ENST00000220959 NKIRAS1Q9NYS0 192 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 SDSP20132 328 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 CAPN2P17655 700 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 TRPC3Q13507 836 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 SV2BQ7L1I2 683 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 GSDMBQ8TAX9 411 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 TUBB4AP04350 444 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 PLIN2Q99541 437 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
UBR5-201ENST00000220959 MIGA1Q8NAN2 632 aa16.68■□□□□ 0.26
UBR5-201ENST00000220959 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 STRN3Q13033 797 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 PPFIBP2Q8ND30 876 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 AFG3L2Q9Y4W6 797 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 CDAN1Q8IWY9 1227 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 LUC7L2Q9Y383 392 aaKnown RBP16.67■□□□□ 0.26
UBR5-201ENST00000220959 SPOPO43791 374 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 TNFAIP3P21580 790 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
UBR5-201ENST00000220959 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
UBR5-201ENST00000220959 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.67■□□□□ 0.26
UBR5-201ENST00000220959 LACTBP83111 547 aaPredicted RBP16.67■□□□□ 0.26
UBR5-201ENST00000220959 PPANQ9NQ55 473 aaKnown RBP16.67■□□□□ 0.26
UBR5-201ENST00000220959 ACEP12821 1306 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 CCDC125Q86Z20 511 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 VPS18Q9P253 973 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 RIOK3O14730 519 aaKnown RBP16.66■□□□□ 0.26
UBR5-201ENST00000220959 NOLC1Q14978 699 aaKnown RBP eCLIP16.66■□□□□ 0.263e-7■□□□□ 9.7
UBR5-201ENST00000220959 ESYT1Q9BSJ8 1104 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 PKD2L1Q9P0L9 805 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
UBR5-201ENST00000220959 PPP1R2P41236 205 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 VIMP08670 466 aaKnown RBP16.66■□□□□ 0.26
UBR5-201ENST00000220959 SDCCAG8Q86SQ7 713 aaPredicted RBP16.66■□□□□ 0.26
UBR5-201ENST00000220959 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
UBR5-201ENST00000220959 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
UBR5-201ENST00000220959 PPP2R5CQ13362 524 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 LPXNO60711 386 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 ZBTB24O43167 697 aaPredicted RBP16.65■□□□□ 0.26
UBR5-201ENST00000220959 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
UBR5-201ENST00000220959 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 FEZ2Q9UHY8 353 aaPredicted RBP16.65■□□□□ 0.26
UBR5-201ENST00000220959 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 NSD2O96028 1365 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 KIF3CO14782 793 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 DKC1O60832 514 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBR5-201ENST00000220959 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 TRAF5O00463 557 aa16.65■□□□□ 0.26
UBR5-201ENST00000220959 LIN9Q5TKA1 542 aa16.64■□□□□ 0.26
UBR5-201ENST00000220959 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 RHOXF2BP0C7M4 288 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 SPOUT1Q5T280 376 aaKnown RBP16.64■□□□□ 0.25
UBR5-201ENST00000220959 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 RBM17Q96I25 401 aaKnown RBP16.64■□□□□ 0.25
UBR5-201ENST00000220959 RHOXF2Q9BQY4 288 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 FYB2Q5VWT5 728 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 MEIS3Q99687 375 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 ZKSCAN3Q9BRR0 538 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 IVNS1ABPQ9Y6Y0 642 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 NUCB1Q02818 461 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 ZNF408Q9H9D4 720 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 LETM2Q2VYF4 491 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 CEP85LQ5SZL2 805 aa16.64■□□□□ 0.25
UBR5-201ENST00000220959 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms