RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ARMT1Q9H993 441 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 KIF3AQ9Y496 699 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 THSD7AQ9UPZ6 1657 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 EVCP57679 992 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 EPB41L4AQ9HCS5 686 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 ESPNB1AK53 854 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 LIG1P18858 919 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 GYG1P46976 350 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 AMIGO3Q86WK7 504 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 B4E1Z4 1266 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 LETM1O95202 739 aaPredicted RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 NEDD4P46934 1319 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 CYB5R4Q7L1T6 521 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 INCENPQ9NQS7 918 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 MIGA1Q8NAN2 632 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 FTOQ9C0B1 505 aaKnown RBP eCLIP9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 NAPBQ9H115 298 aa9.37□□□□□ -0.91
HMGXB4-201ENST00000216106 PRKAB2O43741 272 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 IFNL3Q8IZI9 196 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 LCORLQ8N3X6 602 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 PDLIM2Q96JY6 352 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 ABCF2Q9UG63 623 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 C4AP0C0L4 1744 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 RPS6KA4O75676 772 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 CAMK4Q16566 473 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 ANGEL1Q9UNK9 670 aaKnown RBP9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 COL1A1P02452 1464 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 ZPR1O75312 459 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 RXRAP19793 462 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 NBPF5PQ86XG9 351 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 PGBD1Q96JS3 809 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 MINPP1Q9UNW1 487 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 COL24A1Q17RW2 1714 aa9.36□□□□□ -0.91
HMGXB4-201ENST00000216106 WDR19Q8NEZ3 1342 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 CPLX1O14810 134 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 DACT1Q9NYF0 836 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 ZNF804BA4D1E1 1349 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 GSG1L2A8MUP6 293 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 RC3H1Q5TC82 1133 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 RTCBQ9Y3I0 505 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 SH2B2O14492 632 aaPredicted RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 DHX16O60231 1041 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 TDO2P48775 406 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 ADGRA1Q86SQ6 560 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 STK11IPQ8N1F8 1099 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 NUP62CLQ9H1M0 184 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 ZMYM6O95789 1325 aa9.35□□□□□ -0.91
HMGXB4-201ENST00000216106 ALX1Q15699 326 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 MICU3Q86XE3 530 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 NYXQ9GZU5 481 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 ORC3Q9UBD5 711 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 LY75O60449 1722 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 NR1I2O75469 434 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 CYP7A1P22680 504 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 KLRK1P26718 216 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 UBE4AQ14139 1066 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 CCDC144CPQ8IYA2 1237 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 ARHGEF1Q92888 912 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 USP28Q96RU2 1077 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 RAI14Q9P0K7 980 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 KDM4AO75164 1064 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 METAP2P50579 478 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 CAVIN4Q5BKX8 364 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 SLC10A5Q5PT55 438 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms