RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 B4E1Z4 1266 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 PDE6AP16499 860 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 ITPK1Q13572 414 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
CTNS-201ENST00000046640 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
CTNS-201ENST00000046640 ZNF34Q8IZ26 560 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 ZNF592Q92610 1267 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTNS-201ENST00000046640 LAMA4Q16363 1823 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 IGSF3O75054 1194 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 BCAMP50895 628 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 BICDL1Q6ZP65 573 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 MARCH10Q8NA82 808 aaPredicted RBP15.34■□□□□ 0.05
CTNS-201ENST00000046640 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 ORC3Q9UBD5 711 aaPredicted RBP15.34■□□□□ 0.05
CTNS-201ENST00000046640 ITGB4P16144 1822 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 TRDNQ13061 729 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 HPS5Q9UPZ3 1129 aa15.34■□□□□ 0.05
CTNS-201ENST00000046640 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 SIK1P57059 783 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 RASGRF1Q13972 1273 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
CTNS-201ENST00000046640 ARMT1Q9H993 441 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 TOMM22Q9NS69 142 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 CCDC87Q9NVE4 849 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 PRKAB2O43741 272 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
CTNS-201ENST00000046640 NAA30Q147X3 362 aaPredicted RBP15.33■□□□□ 0.04
CTNS-201ENST00000046640 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.04
CTNS-201ENST00000046640 MICU3Q86XE3 530 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 MIGA1Q8NAN2 632 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 C8orf76Q96K31 380 aa15.33■□□□□ 0.04
CTNS-201ENST00000046640 DDX19AQ9NUU7 478 aaKnown RBP15.33■□□□□ 0.04
CTNS-201ENST00000046640 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 ZNF165P49910 485 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 RRP12Q5JTH9 1297 aaKnown RBP15.32■□□□□ 0.04
CTNS-201ENST00000046640 SPATA5Q8NB90 893 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
CTNS-201ENST00000046640 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 SALL1Q9NSC2 1324 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 U2AF2P26368 475 aaKnown RBP eCLIP15.32■□□□□ 0.04
CTNS-201ENST00000046640 LPIN2Q92539 896 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 PHKBQ93100 1093 aa15.32■□□□□ 0.04
CTNS-201ENST00000046640 MBD4O95243 580 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 ARID5BQ14865 1188 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 A0A1B0GVL5 298 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 ZSCAN25Q6NSZ9 544 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 NFXL1Q6ZNB6 911 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 CCDC24Q8N4L8 307 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
CTNS-201ENST00000046640 TTF1Q15361 905 aaPredicted RBP15.3■□□□□ 0.04
CTNS-201ENST00000046640 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
CTNS-201ENST00000046640 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 RCOR1Q9UKL0 485 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 SLC5A1P13866 664 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 CLIP2Q9UDT6 1046 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 NEDD4P46934 1319 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 ZNF396Q96N95 335 aaPredicted RBP15.3■□□□□ 0.04
CTNS-201ENST00000046640 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
CTNS-201ENST00000046640 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
CTNS-201ENST00000046640 ZNF75DP51815 510 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 CCDC73Q6ZRK6 1079 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 SMAP1Q8IYB5 467 aaPredicted RBP15.29■□□□□ 0.04
CTNS-201ENST00000046640 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 SLIT2O94813 1529 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
CTNS-201ENST00000046640 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 FGFR2P21802 821 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 TPD52L1Q16890 204 aaPredicted RBP15.29■□□□□ 0.04
CTNS-201ENST00000046640 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
CTNS-201ENST00000046640 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 NAPBQ9H115 298 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
CTNS-201ENST00000046640 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 MROH5Q6ZUA9 1318 aa15.29■□□□□ 0.04
CTNS-201ENST00000046640 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 TCRBV5S4A2TA0A5A2 114 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 SMIM22K7EJ46 135 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 UQCRFS1P1P0C7P4 283 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 TNNT1P13805 278 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 ARID4AP29374 1257 aaPredicted RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 CDC27P30260 824 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 METAP2P50579 478 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTNS-201ENST00000046640 STK38Q15208 465 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 CMTR1Q8N1G2 835 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 867.6 ms