RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Gzf1Q4VBD9 706 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Zc3h12cQ5DTV4 884 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Prdm1Q60636 856 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Oxsr1Q6P9R2 527 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Rcan1Q9JHG6 198 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Sh3bgrQ9WUZ7 214 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cdc45Q9Z1X9 566 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Tcof1O08784 1320 aaKnown RBP11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Duox1A2AQ92 1551 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 1700029H14RikE9PY36 240 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Znf326O88291 580 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Rrp1P56183 494 aaKnown RBP11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Slc44a1Q6X893 653 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Bola3Q8CEI1 110 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Sf3b3Q921M3 1217 aaKnown RBP11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Rbm43Q99J64 343 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Tulp1Q9Z273 543 aa11.87□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Krt24A1L317 512 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 VeztQ3ZK22 780 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Pram1Q6BCL1 675 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Atp1a3Q6PIC6 1013 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Prkag3Q8BGM7 489 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 VmacQ8BP01 174 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Sirt2Q8VDQ8 389 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Pcdhb15Q91Y04 786 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Krt84Q99M73 603 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Sil1Q9EPK6 465 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Mapk8ip1Q9WVI9 707 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Myh4Q5SX39 1939 aa11.86□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Pramel3A2AHA7 463 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gm7903A2AWL1 463 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 AV320801A2AWL3 467 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gm15023L7MUB4 467 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Siah1aP61092 282 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Llgl2Q3TJ91 1027 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ccdc174Q3U155 467 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ckap2Q3V1H1 664 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Tsen34Q8BMZ5 316 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Slc5a4bQ91ZP4 660 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Yeats4Q9CR11 227 aaKnown RBP11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Dusp10Q9ESS0 483 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Clic4Q9QYB1 253 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Myh6Q02566 1938 aaKnown RBP11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Stox1B2RQL2 990 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Metap2O08663 478 aaKnown RBP11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 NapbP28663 298 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Kif3aP28741 701 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Washc4Q3UMB9 1173 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Polr3gQ6NXY9 223 aa11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Srek1Q8BZX4 494 aaKnown RBP11.85□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ubn2Q80WC1 1314 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Rbbp6P97868 1790 aaKnown RBP11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Bicdl1A0JNT9 577 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gm13023A2A8N2 498 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Cspp1B2RX88 1205 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Zbtb7aO88939 569 aaKnown RBP11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gnat2P50149 354 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Smarcc1P97496 1104 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gm28047Q3US59 414 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Gimap8Q75N62 688 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Kcnf1Q7TSH7 493 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Slitrk3Q810B9 980 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Ranbp6Q8BIV3 1105 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Olfm5Q8BU90 496 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Paf1Q8K2T8 535 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Stag1Q9D3E6 1258 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Popdc2Q9ES82 367 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Lgr5Q9Z1P4 907 aa11.84□□□□□ -0.51
Cpsf3-211ENSMUST00000222968 Arfgef1G3X9K3 1846 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CltaO08585 235 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cd3dP04235 173 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Rhbdl3P58873 404 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cnnm2Q3TWN3 875 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Gpatch3Q8BIY1 525 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 DymQ8CHY3 669 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ubxn4Q8VCH8 506 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sh3bp5lQ99LH9 392 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Pold4Q9CWP8 107 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Foxo3Q9WVH4 672 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 GakQ99KY4 1305 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 AfdnQ9QZQ1 1820 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Gm43638A0A0J9YU36 694 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Mtx1P47802 317 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Foxp1P58462 705 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Tpm2P58774 284 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Atp1b3P97370 278 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Q3TYL0 343 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sf3b2Q3UJB0 878 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cdkl5Q3UTQ8 938 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Lrrc43Q3V0L5 667 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Hook1Q8BIL5 728 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Hps6Q8BLY7 805 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ccer1Q9CQL2 403 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Mei1Q9D4I2 1268 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Hmgn5Q9JL35 406 aa11.83□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cntnap1O54991 1385 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CrcpO35427 148 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Stx1aO35526 288 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Slc4a4O88343 1079 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Me1P06801 572 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms