RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Gja5Q01231 358 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Esyt2Q3TZZ7 845 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cpa2Q504N0 417 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Glg1Q61543 1175 aaKnown RBP18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Agtpbp1Q641K1 1218 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Tsr2Q8C8T8 191 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Gpr108Q91WD0 569 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Bloc1s2Q9CWG9 143 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Rbm33Q9CXK9 1231 aaKnown RBP18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Sytl4Q9R0Q1 673 aa18.42■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Dennd3A2RT67 1274 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Smarcc2Q6PDG5 1213 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 NsmfQ99NF2 532 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 RarsQ9D0I9 660 aaKnown RBP18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Trmt44Q9D2Q2 713 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Col20a1Q923P0 1320 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cd3dP04235 173 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 ErfeQ6PGN1 340 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Tmem179Q8BHH9 233 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Fsd2Q8BZ52 692 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Rufy2Q8R4C2 606 aa18.41■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Adgra3Q7TT36 1310 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cnnm2Q3TWN3 875 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Ccdc174Q3U155 467 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Bms1Q6PGF5 1284 aaKnown RBP18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Slc44a1Q6X893 653 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Zfp113Q8C689 439 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Iffo2Q8R2V2 512 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 NaspQ99MD9 773 aaKnown RBP18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Stag1Q9D3E6 1258 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 1700018B08RikQ9DA83 213 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cyp2ab1S4R196 498 aa18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Rbm6S4R1W5 1118 aaKnown RBP18.4■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Wdr19Q3UGF1 1341 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Mtcl1Q3UHU5 1945 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Lipo1J3QME6 396 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Dynll1P63168 89 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Dok7Q18PE0 504 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Limch1Q3UH68 1057 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 SfswapQ3USH5 945 aaKnown RBP18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Chrna2Q91X60 512 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Gdf11Q9Z1W4 405 aa18.39■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Mcm4P49717 862 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Csrnp1P59054 583 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Gas1Q01721 343 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Q3TYL0 343 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Cep63Q3UPP8 700 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Tmem59lQ7TNI2 337 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Olfr118Q7TRJ6 321 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Me3Q8BMF3 604 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Gm3893E9Q1I1 302 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 PcQ05920 1178 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Usp48Q3V0C5 1052 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Rgs17Q9QZB0 210 aa18.38■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Vmn2r23E9PXI5 849 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Bnip3O55003 187 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Fsd1Q7TPM6 496 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Rnf41Q8BH75 317 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Tango6Q8C3S2 1079 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 MlphQ91V27 590 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 ZwintQ9CQU5 252 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Epb41l3Q9WV92 929 aa18.37■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Pde11aP0C1Q2 933 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Pde6aP27664 859 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Cdcp1Q5U462 833 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Ccar2Q8VDP4 922 aaKnown RBP18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Uba5Q8VE47 403 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Trim59Q922Y2 403 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Dock5B2RY04 1868 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 NesQ6P5H2 1864 aaKnown RBP18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Zfp831A2ADM8 1628 aa18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 AfdnQ9QZQ1 1820 aaKnown RBP18.36■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Nrxn2E9Q7X7 1710 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 TrdnE9Q9K5 693 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Cct2P80314 535 aaKnown RBP18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Leo1Q5XJE5 667 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Atp2b4Q6Q477 1205 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Adck5Q80V03 582 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Ttc12Q8BW49 704 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Q8C6G1 249 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Paf1Q8K2T8 535 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Sil1Q9EPK6 465 aa18.35■□□□□ 0.53
Ubp1-206ENSMUST00000216558 ImpactO55091 318 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Ppp4cP97470 307 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Wdr93Q402B2 695 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Ehmt1Q5DW34 1296 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Nxf7Q80SZ6 620 aaKnown RBP18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Bap1Q99PU7 728 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Rcan1Q9JHG6 198 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Pet2A2AHY8 747 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Prdm1Q60636 856 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Ctr9Q62018 1173 aaKnown RBP18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 HelbQ6NVF4 1074 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 VmacQ8BP01 174 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Tpcn2Q8BWC0 731 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Slc44a4Q91VA1 707 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Itgb4A2A863 1818 aa18.34■□□□□ 0.53
Ubp1-206ENSMUST00000216558 Sall1Q9ER74 1322 aa18.33■□□□□ 0.53
Ubp1-206ENSMUST00000216558 AsnsQ61024 561 aa18.33■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Nell2Q61220 819 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms