RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Oog1E9Q5G7 496 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Arid4aF8VPQ2 1261 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Gm13128L7MU96 475 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Nbr1P97432 988 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 G3bp1P97855 465 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Plbd2Q3TCN2 594 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Gxylt1Q3UHH8 404 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Lgr6Q3UVD5 967 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Sh2d1b2Q45HK4 132 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ddx55Q6ZPL9 600 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ireb2Q811J3 963 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Lca5lQ8C0X0 741 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ufl1Q8CCJ3 793 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ccar1Q8CH18 1146 aaKnown RBP10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Txnrd3Q99MD6 652 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Fam84aQ9D650 292 aa10.12□□□□□ -0.79
Trim40-203ENSMUST00000172711 Cacna1fQ9JIS7 1985 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Gprin1Q3UNH4 932 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Gm11437Q5QR91 290 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Atg9aQ68FE2 551 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ppp1r26Q6A025 1163 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Amer2Q8CCJ4 672 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Il31raQ8K5B1 716 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Tut1Q8R3F9 869 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 MyocdQ8VIM5 935 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Stag1Q9D3E6 1258 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Txnrd2Q9JLT4 524 aa10.11□□□□□ -0.79
Trim40-203ENSMUST00000172711 Mapkapk5O54992 473 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 L1camP11627 1260 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 CnpP16330 420 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Eps15P42567 897 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Tm4sf1Q64302 202 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Nutm1Q8BHP2 1126 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Fam83aQ8K2P2 436 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Dhx30Q99PU8 1217 aaKnown RBP10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ralgps2Q9ERD6 590 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ripk4Q9ERK0 786 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Il21rQ9JHX3 529 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Cry2Q9R194 592 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Tsc2Q61037 1814 aa10.1□□□□□ -0.79
Trim40-203ENSMUST00000172711 Lbhd1A0A087WPA0 259 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Tbc1d8bA3KGB4 1114 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ankrd44B2RXR6 993 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Slc7a3P70423 618 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Otud5Q3U2S4 566 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Q3UPC7 1272 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Cavin2Q63918 418 aaKnown RBP10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Ccdc148Q6P5U8 527 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Mbtps2Q8CHX6 515 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Borcs6Q9D6W8 360 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Dclk1Q9JLM8 756 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Eif3aP23116 1344 aaKnown RBP10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 CpdO89001 1377 aa10.09□□□□□ -0.79
Trim40-203ENSMUST00000172711 Prss51A0A286YDY8 319 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Eya2O08575 532 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Sult6b1P0CC03 303 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 AppP12023 770 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Tmc2Q8R4P4 888 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Pcdhb5Q91XZ5 792 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Znf330Q922H9 316 aa10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Rrs1Q9CYH6 365 aaKnown RBP10.08□□□□□ -0.8
Trim40-203ENSMUST00000172711 Prl3d3A0A0M6L0J6 224 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gm3893E9Q1I1 302 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Pa2g4P50580 394 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Zfp444Q3TDV8 331 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Erich4Q3UNU4 136 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Sptlc3Q8BG54 563 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 ParnQ8VDG3 624 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Nudt12Q9DCN1 462 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ccne2Q9Z238 404 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ccdc171E9Q1U1 1324 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 NesQ6P5H2 1864 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gm43951A0A0N4SUT6 962 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Phldb3E9QAF4 648 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Speer4dL7N216 212 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Rbm15bQ6PHZ5 887 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ankrd13aQ80UP5 588 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Phf20Q8BLG0 1010 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Myt1Q8CFC2 1127 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Uba5Q8VE47 403 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 NsmfQ99NF2 532 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ccdc96Q9CR92 584 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 RarsQ9D0I9 660 aaKnown RBP10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Apbb1Q9QXJ1 710 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Tulp1Q9Z273 543 aa10.07□□□□□ -0.8
Trim40-203ENSMUST00000172711 Lama3Q61789 3330 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Plxnb2B2RXS4 1842 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gm4340L7N2C4 268 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Mmp10O55123 476 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ets1P27577 440 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ccnd3P30282 292 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Wdr70Q3TWF6 657 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Tbc1d9Q3UYK3 1264 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 NrdcQ8BHG1 1161 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Q8C5K5 320 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Champ1Q8K327 802 aaKnown RBP10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Kiaa0100Q5SYL3 2234 aa10.06□□□□□ -0.8
Trim40-203ENSMUST00000172711 Btn2a2A4QPC6 514 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gjb1P28230 283 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Atp8a2P98200 1148 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms