RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Znf518aB2RRF6 1478 aaKnown RBP17.46■□□□□ 0.39
Pcdha9-201ENSMUST00000115659 Gpr161B2RPY5 545 aa17.46■□□□□ 0.39
Pcdha9-201ENSMUST00000115659 Dzip1lQ499E4 774 aa17.46■□□□□ 0.39
Pcdha9-201ENSMUST00000115659 2310002L09RikQ9D7L5 217 aa17.46■□□□□ 0.39
Pcdha9-201ENSMUST00000115659 Mnat1P51949 309 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ccdc113Q8C5T8 377 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Adcy3Q8VHH7 1145 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Abcc2Q8VI47 1543 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Cnksr1A2A9K7 700 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Caprin2Q05A80 1031 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Glg1Q61543 1175 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Kif5bQ61768 963 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ankrd13dQ6PD24 605 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tpx2A2APB8 745 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Palm3A2TJV2 734 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ankrd35E9Q9D8 996 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Kif5cP28738 956 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mcm7Q61881 719 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Hirip3Q8BLH7 601 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tmx1Q8VBT0 278 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gm5624F6ZZG8 207 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 ByslO54825 436 aaKnown RBP17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Cops6O88545 324 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gm5935Q497S0 212 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Sdccag8Q80UF4 717 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Cnpy2Q9QXT0 182 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ccdc6D3YZP9 469 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Zkscan8Q8BSL0 588 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Zfp202Q8C879 641 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Hdac9Q99N13 588 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Cd274Q9EP73 290 aa17.45■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 LdhaP06151 332 aaKnown RBP17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gigyf2Q6Y7W8 1291 aaKnown RBP17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Q8BZJ8 459 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Krt8P11679 490 aaKnown RBP17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 ArsiQ32KI9 573 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Lmbrd2Q8C561 694 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ccdc186Q8C9S4 917 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gbp2Q9Z0E6 589 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Erbb3Q61526 1339 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tbc1d2B1AVH7 922 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ppp1r9aH3BJD6 1292 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Cep128Q8BI22 1102 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Lin9Q8C735 542 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Rbm33Q9CXK9 1231 aaKnown RBP17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Aifm3Q3TY86 605 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ginm1Q91WR6 327 aa17.44■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Atp2a2O55143 1044 aaKnown RBP17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 PparaP23204 468 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 IntuQ059U7 942 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gm156Q58A37 223 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Pram1Q6BCL1 675 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mxra7Q9CZH7 178 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mast1Q9R1L5 1570 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Prr16A3KMN5 304 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 AU022751B1B0V2 589 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 U2af2P26369 475 aaKnown RBP17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ccdc25Q78PG9 208 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Prpf40bQ80W14 870 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Sept14Q9DA97 430 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Dpf1Q9QX66 387 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Sept6Q9R1T4 434 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Pak1O88643 545 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Frat2Q8K025 231 aa17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mrps25Q9D125 171 aaKnown RBP17.43■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ccdc189Q6NZQ0 333 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ifih1Q8R5F7 1025 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tbc1d4Q8BYJ6 1307 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Prkab2Q6PAM0 271 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Nek5Q7TSC3 627 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ddx23D3Z0M9 819 aaKnown RBP17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Abcb4P21440 1276 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Elf2Q9JHC9 593 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Eftud2O08810 971 aaKnown RBP17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Itga6Q61739 1091 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Arhgef40Q3UPH7 1517 aa17.42■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Kifc2O08672 792 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Timm10P62073 90 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ubac1Q8VDI7 409 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gucy1a3Q9ERL9 691 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Zfpm1O35615 995 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Atp8a2P98200 1148 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ttc27Q8CD92 847 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Pdrg1P59048 133 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Nsrp1Q5NCR9 542 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Exoc3Q6KAR6 755 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Lrrc2Q8VDB8 371 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tab2Q99K90 693 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Polr2dQ9D7M8 142 aaKnown RBP17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Ift20Q61025 132 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 KaznQ69ZS8 779 aa17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Akap8Q9DBR0 687 aaKnown RBP17.41■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Psmb7P70195 277 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Krt77Q6IFZ6 572 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Uba5Q8VE47 403 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Casp1P29452 402 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Sh3tc1G3X9F6 1346 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mx1P09922 631 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Zfp51Q3U4L8 781 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Svs3aF2Z472 265 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms