RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Lipo1J3QME6 396 aa30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Isy1Q69ZQ2 285 aaKnown RBP30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Rbm33Q9CXK9 1231 aaKnown RBP30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Sytl4Q9R0Q1 673 aa30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Mad1l1Q9WTX8 717 aaKnown RBP30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Cnnm2Q3TWN3 875 aa30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Nxf7Q80SZ6 620 aaKnown RBP30.29■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Wdr19Q3UGF1 1341 aa30.28■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Dennd3A2RT67 1274 aa30.28■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Vmn2r23E9PXI5 849 aa30.28■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Msl1Q6PDM1 616 aa30.28■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Mrpl44Q9CY73 333 aaKnown RBP30.28■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Fam83bQ0VBM2 1012 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Ccdc174Q3U155 467 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Ccdc66Q6NS45 935 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Tmem59lQ7TNI2 337 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Myh13B1AR69 1938 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Myh2G3UW82 1942 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Cep63Q3UPP8 700 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Slc44a1Q6X893 653 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Tex2Q6ZPJ0 1128 aaKnown RBP30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Sil1Q9EPK6 465 aa30.27■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Cd3dP04235 173 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 SfswapQ3USH5 945 aaKnown RBP30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Fchsd1Q6PFY1 688 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Trim59Q922Y2 403 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 NsmfQ99NF2 532 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Stag1Q9D3E6 1258 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Aox3G3X982 1335 aa30.26■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Dynll1P63168 89 aa30.25■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Ccdc51Q3URS9 406 aa30.25■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Pla2g12bQ99P27 195 aa30.25■■■□□ 2.43
Tpm1-216ENSMUST00000113707 4933402E13RikQ9D4D2 429 aa30.25■■■□□ 2.43
Tpm1-216ENSMUST00000113707 RarsQ9D0I9 660 aaKnown RBP30.25■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Prdm1Q60636 856 aa30.24■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Ano1Q8BHY3 960 aa30.24■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Atp8b3Q6UQ17 1335 aa30.24■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Pde6aP27664 859 aa30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Kif22Q3V300 660 aa30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Tpcn2Q8BWC0 731 aa30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Nap1l3Q794H2 544 aa30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Rnf41Q8BH75 317 aa30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Ccdc47Q9D024 483 aaKnown RBP30.23■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Rgs9O54828 675 aa30.22■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Col20a1Q923P0 1320 aa30.22■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Ttc12Q8BW49 704 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Sned1Q70E20 1403 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Vsig10D3YX43 558 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Pde11aP0C1Q2 933 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Fbln2P37889 1221 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Q3TYL0 343 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Olfr118Q7TRJ6 321 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 R3hcc1Q8BSI6 488 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Igbp1bQ9QZ29 343 aa30.21■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Pnpla6Q3TRM4 1355 aa30.2■■■□□ 2.43
Tpm1-216ENSMUST00000113707 Esyt2Q3TZZ7 845 aa30.2■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Babam1Q3UI43 333 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Togaram1Q6A070 1776 aaKnown RBP30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Nup188Q6ZQH8 1759 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Ube2hP62257 183 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Best3Q6H1V1 669 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Ccdc178Q8CDV0 866 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Alg3Q8K2A8 438 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Paf1Q8K2T8 535 aa30.19■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Sall1Q9ER74 1322 aa30.18■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Gm9992B2RWK3 458 aa30.18■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Ehmt1Q5DW34 1296 aa30.18■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Unc93aQ710D3 458 aa30.18■■■□□ 2.42
Tpm1-216ENSMUST00000113707 PcQ05920 1178 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Fbxo41Q6NS60 873 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Adgra3Q7TT36 1310 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 VmacQ8BP01 174 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Srgap1Q91Z69 1062 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Adamtsl1Q8BLI0 1745 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 CpdO89001 1377 aa30.17■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Cyp26a1O55127 497 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Me1P06801 572 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Kif4P33174 1231 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Tmed8Q3UHI4 326 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Cdcp1Q5U462 833 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Pcsk7Q61139 770 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Tmem179Q8BHH9 233 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Trmt44Q9D2Q2 713 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 1700018B08RikQ9DA83 213 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Pet2A2AHY8 747 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Bnip3O55003 187 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Glg1Q61543 1175 aaKnown RBP30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Rcan1Q9JHG6 198 aa30.16■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Metap2O08663 478 aaKnown RBP30.15■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Esyt1Q3U7R1 1092 aaKnown RBP30.15■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Hps6Q8BLY7 805 aa30.15■■■□□ 2.42
Tpm1-216ENSMUST00000113707 WdpcpQ8C456 722 aa30.15■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Fam170aQ66LM6 333 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 U2af1l4Q8BGJ9 220 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 MlphQ91V27 590 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Gm20425E9Q035 978 aaKnown RBP30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Tnni2P13412 182 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 SrprbP47758 269 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Csrnp1P59054 583 aa30.14■■■□□ 2.42
Tpm1-216ENSMUST00000113707 Apba2P98084 750 aa30.14■■■□□ 2.42
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms