RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Atf7Q8R0S1 413 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cog6Q8R3I3 657 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pfdn6Q03958 127 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Spdl1Q923A2 608 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Lemd3Q9WU40 921 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Psma3O70435 255 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Babam1Q3UI43 333 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Leo1Q5XJE5 667 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Fbxl5Q8C2S5 690 aa6.79□□□□□ -1.32
Vcan-203ENSMUST00000109546 Tnip3A0A1D5RMN0 279 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Tldc2A2ACG1 198 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Eef1bO70251 225 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Lmntd2Q0VET5 664 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Klhl14Q69ZK5 630 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Osbpl1aQ91XL9 950 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rpl13P47963 211 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Atp11aP98197 1187 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Zfp91Q62511 572 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Efcab14Q8BGQ6 484 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Map7d3A2AEY4 876 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ncf2O70145 525 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Hoxc8P09025 242 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Txndc2Q6P902 515 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 NemfQ8CCP0 1064 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Kif17Q99PW8 1038 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 DiabloQ9JIQ3 237 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 CltaO08585 235 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Fam207aP58468 219 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Atp8b1Q148W0 1251 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ppp2r5aQ6PD03 486 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Zscan12Q9Z1D7 501 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Atf7ipQ7TT18 1306 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Asic3Q6X1Y6 530 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Kdm1aQ6ZQ88 853 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rad54l2Q99NG0 1466 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cwc27Q3TKY6 469 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Lsg1Q3UM18 644 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Igbp1Q61249 340 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Usp6nlQ80XC3 819 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rab14Q91V41 215 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 1700109H08RikQ9D9C0 210 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Krt1P04104 637 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 LmnaP48678 665 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Sh3bp1P55194 680 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Zkscan4Q5SZT6 480 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Gngt1Q61012 74 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Calml3Q9D6P8 149 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ppp1r12aQ9DBR7 1029 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Nsd2Q8BVE8 1365 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 RasefQ5RI75 627 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 PodnQ7TQ62 611 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Dhx38Q80X98 1228 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Swi5Q8K3D3 89 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Tmed10Q9D1D4 219 aaKnown RBP6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Capn12Q9ER56 720 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Wdr44Q6NVE8 915 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rassf6Q80UQ2 353 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Nup58Q8R332 587 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 ApobrQ8VBT6 942 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pde6cQ91ZQ1 861 aa6.78□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ccdc62E9PVD1 701 aa6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 Gjb2Q00977 226 aa6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 Triml1Q8BVP1 470 aa6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 HnrnprQ8VHM5 632 aaKnown RBP6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 Kif2cQ922S8 721 aa6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ppil4Q9CXG3 492 aaKnown RBP6.77□□□□□ -1.32
Vcan-203ENSMUST00000109546 Gm2030D3Z7C4 212 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Nfkbil1O88995 381 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Srrm1Q52KI8 946 aaKnown RBP6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Unc13aQ4KUS2 1712 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Terf2O35144 541 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Kdm4aQ8BW72 1064 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Tcp11l1Q8BTG3 509 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Psma4Q9R1P0 261 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Krt13P08730 437 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rasgrf2P70392 1189 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Inf2Q0GNC1 1273 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rnf10Q3UIW5 804 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 AmfrQ9R049 643 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ppip5k1A2ARP1 1436 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Svs3aF2Z472 265 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ift81O35594 676 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Arhgap44Q5SSM3 814 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Pik3r4Q8VD65 1358 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Dapk3O54784 448 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Tshz2Q68FE9 1030 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ube2oQ6ZPJ3 1288 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rapgef3Q8VCC8 918 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ccdc153P0C7Q1 202 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 MyclP10166 368 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rnf216P58283 853 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Pof1bQ8K4L4 587 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Trim12cD3Z3L3 497 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Sesn1P58006 492 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 P4ha1Q60715 534 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Phldb3E9QAF4 648 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 CenpuQ8C4M7 410 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Cabcoco1Q8CDT7 208 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Fgfr1op2Q9CRA9 253 aa6.77□□□□□ -1.33
Vcan-203ENSMUST00000109546 Sun1Q9D666 913 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 82.7 ms