RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Nup62clA2AG10 272 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ptgs1P22437 602 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Stmn1P54227 149 aaKnown RBP11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Rnf40Q3U319 1001 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ppp1r12cQ3UMT1 782 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Retreg2Q6NS82 541 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Larp6Q8BN59 492 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ubac1Q8VDI7 409 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Terf2ipQ91VL8 393 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Bbs5Q9CZQ9 341 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Taf7Q9R1C0 341 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Sbno1Q689Z5 1390 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Palm3A2TJV2 734 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Exoc3l2D3YUP5 789 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ccdc82Q6PG04 518 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ncaph2Q8BSP2 607 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Pde5aQ8CG03 865 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Nup58Q8R332 587 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Tpx2A2APB8 745 aaKnown RBP11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ccdc110Q3V125 848 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Nlrp2Q4PLS0 1046 aaKnown RBP11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Leo1Q5XJE5 667 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ifit2Q64112 472 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ctnna3Q65CL1 895 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 A2mQ6GQT1 1474 aa11.99□□□□□ -0.49
Vcan-202ENSMUST00000109544 Slc8a1P70414 970 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 MmeQ61391 750 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 SpopQ6ZWS8 374 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 HhatQ8BMT9 499 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Nsfl1cQ9CZ44 370 aaKnown RBP11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Naip5Q9R016 1403 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Zap70P43404 618 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ano9P86044 747 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Rbm19Q8R3C6 952 aaKnown RBP11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Tsnaxip1Q99P25 704 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 1700006A11RikB9EHI3 544 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Gm10110D3Z5M2 615 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Chmp6P0C0A3 200 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ripply1Q2WG77 201 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Fam228aQ8CDW1 299 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Asic2Q925H0 512 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ankrd26Q811D2 1581 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Atp6v1aP50516 617 aaKnown RBP11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Utp18Q5SSI6 552 aaKnown RBP11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Zranb1Q7M760 708 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 GptQ8QZR5 496 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Klhl20Q8VCK5 604 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Angptl3Q9R182 455 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Lrrc74aA0A1Y7VMD6 494 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Speer2E9Q9U2 264 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Arl1P61211 181 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Q3TYL0 343 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Osbpl5Q9ER64 874 aa11.98□□□□□ -0.49
Vcan-202ENSMUST00000109544 Mug1P28665 1476 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Taf4E9QAP7 1042 aaKnown RBP11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Mcm7Q61881 719 aaKnown RBP11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Krt20Q9D312 431 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Elf2Q9JHC9 593 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Esyt2Q3TZZ7 845 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Cracr2aQ3UP38 310 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Jade3Q6IE82 823 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ppp2r5bQ6PD28 497 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 B4galnt4Q766D5 1034 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Traf3ip3Q8C0G2 513 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ifih1Q8R5F7 1025 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Pik3ap1Q9EQ32 811 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 4930548H24RikQ9D496 437 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Atp12aQ9Z1W8 1035 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 NexmifQ5DTT1 1515 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 CltaO08585 235 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Dph6Q9CQ28 267 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Abcc5Q9R1X5 1436 aa11.97□□□□□ -0.49
Vcan-202ENSMUST00000109544 Abcb4P21440 1276 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Gadd45bP22339 160 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Pdrg1P59048 133 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Nucks1Q80XU3 234 aaKnown RBP11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Fam114a2Q8VE88 497 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Mroh7A2AVR2 1279 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ccdc175E9PVB3 822 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Egfem1Q8C088 590 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ccdc189Q6NZQ0 333 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Ccdc155Q80VJ8 648 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Krt222Q8CCX5 294 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Plcd3Q8K2J0 785 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Zbtb3Q91X45 518 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Basp1Q91XV3 226 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Stx12Q9ER00 274 aa11.96□□□□□ -0.49
Vcan-202ENSMUST00000109544 Pak1O88643 545 aa11.96□□□□□ -0.5
Vcan-202ENSMUST00000109544 Rapgef1Q3UHC1 1224 aa11.96□□□□□ -0.5
Vcan-202ENSMUST00000109544 Exoc3Q6KAR6 755 aa11.96□□□□□ -0.5
Vcan-202ENSMUST00000109544 Tmx1Q8VBT0 278 aa11.96□□□□□ -0.5
Vcan-202ENSMUST00000109544 Tekt2Q922G7 430 aa11.96□□□□□ -0.5
Vcan-202ENSMUST00000109544 Zc3h12cQ5DTV4 884 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Atp1a2Q6PIE5 1020 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Dydc2Q9D3X8 139 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Kcnh3Q9WVJ0 1095 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Magi1Q6RHR9 1471 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Tuft1O08970 390 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Lrriq3Q14DL3 633 aa11.95□□□□□ -0.5
Vcan-202ENSMUST00000109544 Krit1Q6S5J6 736 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms