RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Stx8O88983 236 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Casp1P29452 402 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Ifit1bl2Q3U687 466 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Secisbp2lQ6A098 1086 aaKnown RBP11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Tfcp2Q9ERA0 502 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Dctn1O08788 1281 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Abcd1P48410 736 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Atg9aQ68FE2 551 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Morc2aQ69ZX6 1030 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Abtb2Q7TQI7 1024 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Fam43aQ8BUP8 424 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Ufl1Q8CCJ3 793 aaKnown RBP11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Rtn1Q8K0T0 780 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Pcdhb22Q91XZ8 794 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Fam76aQ922G2 307 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Yeats4Q9CR11 227 aaKnown RBP11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 MicalclQ9D5U9 680 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Col15a1O35206 1367 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Arid4aF8VPQ2 1261 aaKnown RBP11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Cyp2d10P24456 504 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Kmt5bQ3U8K7 883 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Ctdspl2Q8BG15 465 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Dnm3Q8BZ98 863 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Lonrf3Q9D4H7 753 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Ltb4r2Q9JJL9 360 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Mast3Q3U214 1321 aa11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Ktn1Q61595 1327 aaKnown RBP11.89□□□□□ -0.51
Top1-201ENSMUST00000109468 Slc1a4O35874 532 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Tubgcp2Q921G8 905 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 CpvlQ9D3S9 478 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Chaf1aQ9QWF0 911 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Smarcc2Q6PDG5 1213 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Bola3Q8CEI1 110 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 ZgpatQ8VDM1 511 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Krt23Q99PS0 422 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Magi2Q9WVQ1 1275 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Npc1l1Q6T3U4 1333 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Gm43638A0A0J9YU36 694 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Dennd3A2RT67 1274 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Cyp3a57D3YYZ0 503 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Gm5624F6ZZG8 207 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Ube2oQ6ZPJ3 1288 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Wdr3Q8BHB4 942 aaKnown RBP11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Mei4Q8BRM6 389 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Rbm5Q91YE7 815 aaKnown RBP11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Cfap45Q9D9U9 551 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Lmbr1Q9JIT0 490 aa11.88□□□□□ -0.51
Top1-201ENSMUST00000109468 Tbc1d8bA3KGB4 1114 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Pcdhb9E9Q5G2 828 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Hspa4Q61316 841 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Miga2Q8BK03 593 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Tsen34Q8BMZ5 316 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Desi2Q9D291 194 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Abcb6Q9DC29 842 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Kdm3aQ6PCM1 1323 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Pde4bB1AWC9 736 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Rgs9O54828 675 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Actn3O88990 900 aaKnown RBP11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 LtkP08923 888 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Scaf1Q5U4C3 1256 aaKnown RBP11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Tcp11l1Q8BTG3 509 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Tango6Q8C3S2 1079 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Znf131Q8K3J5 619 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Rbm43Q99J64 343 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Mei1Q9D4I2 1268 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Zkscan5Q9Z1D8 819 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Ift172Q6VH22 1749 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Tcof1O08784 1320 aaKnown RBP11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Dhx8A2A4P0 1244 aaKnown RBP11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Slc4a1P04919 929 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 NsmfQ99NF2 532 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Klhl10Q9D5V2 608 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Sos2Q02384 1333 aa11.87□□□□□ -0.51
Top1-201ENSMUST00000109468 Cyp26c1B2RXA7 518 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Sh3bp1P55194 680 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Exosc10P56960 887 aaKnown RBP11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Dhx40Q6PE54 779 aaKnown RBP11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Triml1Q8BVP1 470 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Brd3Q8K2F0 726 aaKnown RBP11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Arl8aQ8VEH3 186 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Tlcd1Q99JT6 247 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Lonp2Q9DBN5 852 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Sel1lQ9Z2G6 790 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Pramel3A2AHA7 463 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Gm7903A2AWL1 463 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 AV320801A2AWL3 467 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Gm15023L7MUB4 467 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Ctdp1Q7TSG2 960 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Ipo7Q9EPL8 1038 aaKnown RBP11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Suclg2Q9Z2I8 433 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Tns3Q5SSZ5 1440 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Ppp1r21Q3TDD9 780 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Exoc5Q3TPX4 708 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 MpndQ3TV65 487 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 MycbpapQ5SUV2 932 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 IqcgQ80W32 419 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 SnrkQ8VDU5 748 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Efcc1Q9JJF6 558 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Zeb2Q9R0G7 1215 aa11.86□□□□□ -0.51
Top1-201ENSMUST00000109468 Simc1E9Q6E9 1354 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms