RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Cdca8Q8BHX3 289 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Vps53Q8CCB4 832 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Kcnn1Q9EQR3 537 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Usp5P56399 858 aaKnown RBP12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Tekt3Q6X6Z7 490 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 9230110C19RikQ8CC70 267 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Osbpl5Q9ER64 874 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Tsr2Q8C8T8 191 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Api5O35841 504 aaKnown RBP12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Esyt1Q3U7R1 1092 aaKnown RBP12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Kmt5bQ3U8K7 883 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Hdac9Q99N13 588 aa12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 IkQ9Z1M8 557 aaKnown RBP12.04□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Ms4a2P20490 235 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 NpeppsQ11011 920 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Ppp2r5bQ6PD28 497 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Sptlc3Q8BG54 563 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 HdlbpQ8VDJ3 1268 aaKnown RBP12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Cxcl11Q9JHH5 100 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Ahnak2E9PYB0 1738 aaKnown RBP12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Prdm1Q60636 856 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Terf2ipQ91VL8 393 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Zbtb22Q9Z0G7 638 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Usp42B2RQC2 1324 aaKnown RBP12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Mical1Q8VDP3 1048 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Bmp2kQ91Z96 1138 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Trmt44Q9D2Q2 713 aa12.03□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Zbtb21E9Q444 1094 aa12.02□□□□□ -0.48
Ldb3-205ENSMUST00000090040 EngaseQ8BX80 734 aa12.02□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Vars2Q3U2A8 1060 aa12.02□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Ccdc82Q6PG04 518 aa12.02□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Fam102bQ8BQS4 339 aa12.02□□□□□ -0.48
Ldb3-205ENSMUST00000090040 Col18a1P39061 1774 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 ArsiQ32KI9 573 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Wdr93Q402B2 695 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Mb21d2Q8C525 428 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Clip2Q9Z0H8 1047 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Npy5rO70342 466 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Vps37dQ810I0 261 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ccne2Q9Z238 404 aa12.02□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Olfr247E9PVJ7 320 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ccdc85cE9Q6B2 420 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Olfr819K7N727 320 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tmtc2Q56A06 836 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Taf3Q5HZG4 932 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Lrit1Q8K099 624 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Emilin1Q99K41 1017 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Aox4Q3TYQ9 1336 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Prr16A3KMN5 304 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Pkp1P97350 728 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ncf1Q09014 390 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 MpndQ3TV65 487 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gm5592Q3V0A6 857 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Paf1Q8K2T8 535 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Krt23Q99PS0 422 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Sf3b3Q921M3 1217 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Stag1Q9D3E6 1258 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Med23Q80YQ2 1367 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ktn1Q61595 1327 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Mcm3P25206 812 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tmed8Q3UHI4 326 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ppm1eQ80TL0 749 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gtf3c5Q8R2T8 520 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Nop14Q8R3N1 860 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gdf11Q9Z1W4 405 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Adgrb1Q3UHD1 1582 aa12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Kiaa0232Q80U59 1396 aaKnown RBP12.01□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Myo1bP46735 1107 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Dok7Q18PE0 504 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gas2l3Q3UWW6 683 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Leo1Q5XJE5 667 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Pold4Q9CWP8 107 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Snapc4Q8BP86 1333 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gtf3c3Q3TMP1 882 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Kif1bpQ6ZPU9 617 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ubxn10Q8BG34 277 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 VmacQ8BP01 174 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Pus3Q9JI38 481 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Siglec1Q62230 1695 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Slc27a3O88561 667 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Snai1Q02085 264 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Phf14Q9D4H9 881 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Fez1Q8K0X8 392 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Pik3ap1Q9EQ32 811 aa12□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Cavin1O54724 392 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ccdc174Q3U155 467 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 WaslQ91YD9 501 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Add2Q9QYB8 725 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Wnk3Q80XP9 1757 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gadd45bP22339 160 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ccdc172Q810N9 267 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ccar2Q8VDP4 922 aaKnown RBP11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Stxbp4Q9WV89 557 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Rtkn2Q14B46 604 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Trim56Q80VI1 734 aaKnown RBP11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Chaf1aQ9QWF0 911 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Slc4a1P04919 929 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Slc44a1Q6X893 653 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Olfr118Q7TRJ6 321 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 IncenpQ9WU62 880 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms