RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Eif3bQ8JZQ9 803 aaKnown RBP16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Mcur1Q9CXD6 340 aa16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Cacna2d4Q5RJF7 1116 aa16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Asic1Q6NXK8 526 aa16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Fam160b2Q80YR2 744 aa16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Pym1Q8CHP5 203 aaKnown RBP16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Tmco5aQ9D9D5 303 aa16.43■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Gm5934D3Z4U6 212 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Trove2O08848 538 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 SkiQ60698 725 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Ercc5P35689 1170 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Krit1Q6S5J6 736 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Kdm1aQ6ZQ88 853 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Cgref1Q8R1U2 281 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Tsnaxip1Q99P25 704 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 BC005561E9Q5E2 1589 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Cdc23Q8BGZ4 597 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Larp6Q8BN59 492 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Stim2P83093 746 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Ints4Q8CIM8 964 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Klc4Q9DBS5 619 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Mx2Q9WVP9 655 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Spata31d1bE9QA57 1361 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Atg4a-psA0A0G2JFS9 396 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Sdccag8Q80UF4 717 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Slc51bQ80WK2 128 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Atg4aQ8C9S8 396 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Naa16Q9DBB4 864 aa16.42■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 DesP31001 469 aaKnown RBP16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Ppp1r12cQ3UMT1 782 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Vps37dQ810I0 261 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Grin2aP35436 1464 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 MarcksP26645 309 aaKnown RBP16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Rad23aP54726 363 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Ankle2Q6P1H6 964 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Rab44Q8CB87 725 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Sos2Q02384 1333 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 KaznQ69ZS8 779 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Wdr44Q6NVE8 915 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Csrnp2Q8BGQ2 534 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Stac3Q8BZ71 360 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Spata2Q8K004 515 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 ZgpatQ8VDM1 511 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Calml3Q9D6P8 149 aa16.41■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Ppfia4B8QI36 1187 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Calm1P0DP26 149 aaKnown RBP16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Calm2P0DP27 149 aaKnown RBP16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Calm3P0DP28 149 aaKnown RBP16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Rtn1Q8K0T0 780 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Atad3Q925I1 591 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Gm16486A0A1D5RMD1 1434 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Triml1Q8BVP1 470 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Sh2d4bA6X942 431 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Grm8P47743 908 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Nek5Q7TSC3 627 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Cep128Q8BI22 1102 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Hexim1Q8R409 356 aaKnown RBP16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Cep83Q9D5R3 692 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Rsph3bQ9DA80 389 aa16.4■□□□□ 0.22
Pcdha1-201ENSMUST00000070797 Csrnp1P59054 583 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Hook2Q7TMK6 716 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Acnat2Q8BGG9 420 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Neo1P97798 1493 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Filip1Q9CS72 1211 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Krt90E9Q1Z0 538 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Panx2Q6IMP4 677 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Zbtb3Q91X45 518 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Pak1O88643 545 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 HhatQ8BMT9 499 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Kcnn1Q9EQR3 537 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Rapgef4Q9EQZ6 1011 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 EcsitQ9QZH6 435 aa16.39■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Tpx2A2APB8 745 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Rbm5Q91YE7 815 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Gapvd1Q6PAR5 1458 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Ncf2O70145 525 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Rnf40Q3U319 1001 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Pex1Q5BL07 1284 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Nlrp3Q8R4B8 1033 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Nrbp1Q99J45 535 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Tcerg1lQ3B807 590 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Cd209bQ8CJ91 325 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Plagl1Q9JLQ4 704 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Eps15P42567 897 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Efcab14Q8BGQ6 484 aa16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Edc4Q3UJB9 1406 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Pde4bB1AWC9 736 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 GnaqP21279 359 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Vps41Q5KU39 853 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Mphosph6Q9D1Q1 161 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Cwc25Q9DBF7 416 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 AU022751B1B0V2 589 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Mknk2Q8CDB0 459 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Calr3Q9D9Q6 380 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Mapk8ip1Q9WVI9 707 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Atp2b1G5E829 1220 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Zfyve27Q3TXX3 415 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Ccdc28aQ8CEI3 192 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 Gdap1l1Q8VE33 370 aa16.37■□□□□ 0.21
Pcdha1-201ENSMUST00000070797 1700113H08RikE9Q9Q5 327 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms