RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Kri1Q8VDQ9 704 aaKnown RBP11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Sh3bp1P55194 680 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ank1Q02357 1862 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Tmem87aQ8BXN9 555 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Arl8aQ8VEH3 186 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Carmil3Q3UFQ8 1375 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Serpinb6bO08804 377 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Paxbp1P58501 919 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Usp13Q5BKP2 858 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Zbtb43Q9DAI4 467 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Trim25Q61510 634 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pcdhb14Q6PB90 796 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ciao1Q99KN2 339 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 BccipQ9CWI3 316 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cap2Q9CYT6 476 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Abcb6Q9DC29 842 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Thsd7aQ69ZU6 1645 aa11.31□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Casz1Q9CWL2 1761 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Epha2Q03145 977 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cers3Q1A3B0 383 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Creld2Q9CYA0 350 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Vps33aQ9D2N9 598 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Dapk3O54784 448 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ccdc102aQ3TMW1 549 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ppp4r3bQ922R5 820 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ehd4Q9EQP2 541 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Jakmip2D3YXK0 820 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Smg7Q5RJH6 1138 aaKnown RBP11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cdc37Q61081 379 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Tnks1bp1P58871 1720 aa11.3□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Nwd2Q6P5U7 1742 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 GmnnO88513 206 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pla2g4fQ50L41 855 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Nlrp9aQ66X03 949 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Clca2Q8BG22 942 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Bola3Q8CEI1 110 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ubr2Q6WKZ8 1755 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Wnk3Q80XP9 1757 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cdc27A2A6Q5 825 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pcdhb9E9Q5G2 828 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Gm10134F6ZQC6 126 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Prl2c1Q5SVL9 228 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Fam160b2Q80YR2 744 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Kcnj14Q8JZN3 434 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ankrd1Q9CR42 319 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Bcl9Q9D219 1425 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pde4bB1AWC9 736 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ugt1a6bK9J7B2 531 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pde6aP27664 859 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Grin1P35438 938 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Uri1Q3TLD5 531 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ccnl1Q52KE7 532 aaKnown RBP11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Gm12185Q5NCB2 835 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ugt1a6Q64435 531 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ugt1a7cQ6ZQM8 531 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Pnpla2Q8BJ56 486 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Haus7Q8BKT8 364 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 9230110C19RikQ8CC70 267 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Tmx1Q8VBT0 278 aa11.29□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Actn3O88990 900 aaKnown RBP11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cyp19a1P28649 503 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cplx2P84086 134 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Mctp2Q5RJH2 878 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ctdspl2Q8BG15 465 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Sptlc3Q8BG54 563 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ranbp6Q8BIV3 1105 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Mcm6P97311 821 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Zbtb38Q3LR78 1197 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Spag5Q7TME2 1165 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Fam43aQ8BUP8 424 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Fam114a1Q9D281 569 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Kcnh3Q9WVJ0 1095 aa11.28□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Plekhd1B2RPU2 505 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Krt39Q6IFX4 482 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 RbsnQ80Y56 783 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Etf1Q8BWY3 437 aaKnown RBP11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Klhl30Q8C3F7 581 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Mtmr6Q8VE11 617 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Tubgcp2Q921G8 905 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 CpdO89001 1377 aa11.27□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Agtpbp1Q641K1 1218 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Wdr3Q8BHB4 942 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pcdhb22Q91XZ8 794 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Eaf2Q91ZD6 262 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Filip1Q9CS72 1211 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ppil4Q9CXG3 492 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Wdr19Q3UGF1 1341 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cyp3a59D3Z2W7 503 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Washc4Q3UMB9 1173 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ankrd40Q5SUE8 363 aa11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Dpf2Q61103 391 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Nip7Q9CXK8 180 aaKnown RBP11.27□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Gm5624F6ZZG8 207 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Eif5P59325 429 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cdkl5Q3UTQ8 938 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Bag1Q60739 355 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Mns1Q61884 491 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pram1Q6BCL1 675 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Drc7Q6V3W6 876 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ces1dQ8VCT4 565 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms