RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ehd4Q9EQP2 541 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Prr5lA2AVJ5 370 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Jakmip2D3YXK0 820 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Unc5clQ6R653 518 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Tpcn2Q8BWC0 731 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Gdf11Q9Z1W4 405 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Armc3A2AU72 881 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Nfil3O08750 462 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 RragbQ6NTA4 374 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Arhgef6Q8K4I3 771 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ube3bQ9ES34 1070 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Gtf2iQ9ESZ8 998 aaKnown RBP13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Setdb1O88974 1307 aa13.57□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Gm4340L7N2C4 268 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Tom1l2Q5SRX1 507 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cc2d1bQ8BRN9 848 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 MeiocA2AG06 965 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Spata18Q0P557 537 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 FanccP50652 591 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ccdc102aQ3TMW1 549 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cyp2d12Q8BVD2 504 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Bst2Q8R2Q8 172 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Oas2E9Q9A9 742 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cfap73J3QPZ5 306 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Gna11P21278 359 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Znf667Q2TL60 609 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 DbnlQ62418 436 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Abcf1Q6P542 837 aaKnown RBP13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Klhl10Q9D5V2 608 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Akr1c19G3X9Y6 323 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Hvcn1Q3U2S8 269 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ano2Q8CFW1 1002 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Pold4Q9CWP8 107 aa13.56□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Pde8bE9Q4S1 865 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Kif3cO35066 796 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 LdhaP06151 332 aaKnown RBP13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Sap30bpQ02614 308 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Haus6Q6NV99 933 aaKnown RBP13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Tmtc2Q56A06 836 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Kiaa1024Q8K3V7 917 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ube4aE9Q735 1028 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Gadd45bP22339 160 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 GalcP54818 684 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Nlrp2Q4PLS0 1046 aaKnown RBP13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Arid3aQ62431 601 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 ItpripQ3TNL8 555 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Kif1bpQ6ZPU9 617 aa13.55□□□□□ -0.24
Pcif1-201ENSMUST00000041643 PaoxQ8C0L6 504 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Kdm4cQ8VCD7 1054 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Acot9Q9R0X4 439 aaKnown RBP13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Jakmip3Q5DTN8 844 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ddx31Q6NZQ2 687 aaKnown RBP13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Srp68Q8BMA6 625 aaKnown RBP13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Rps6ka4Q9Z2B9 773 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Aox2Q5SGK3 1345 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Secisbp2lQ6A098 1086 aaKnown RBP13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Stag1Q9D3E6 1258 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ftsj3Q9DBE9 838 aaKnown RBP13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Npc1l1Q6T3U4 1333 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cyp2c23E9Q5K4 494 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Kiaa0319Q5SZV5 1081 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Snx13Q6PHS6 957 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Abcc10Q8R4P9 1501 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ccdc122Q8BVN0 290 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Plcd1Q8R3B1 756 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Hps4Q99KG7 671 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Haus2Q9CQS9 234 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Mmel1Q9JLI3 765 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 CenphQ9QYM8 241 aa13.54□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Tuft1O08970 390 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 AbraQ8BUZ1 375 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Stn1Q8K2X3 378 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Sycp2lA0A0M3U1B0 842 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Spocd1B1ASB6 936 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Hspd1P63038 573 aaKnown RBP13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 SdsQ8VBT2 327 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Rbm43Q99J64 343 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cd274Q9EP73 290 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Pafah1b1P63005 410 aaKnown RBP13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Paxip1Q6NZQ4 1056 aa13.53□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Asic1Q6NXK8 526 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Sgsm2Q80U12 1005 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ndufa8Q9DCJ5 172 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Abca8aQ8K442 1620 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Susd4Q8BH32 490 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ubac1Q8VDI7 409 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Cfap53Q9D439 514 aa13.52□□□□□ -0.24
Pcif1-201ENSMUST00000041643 MthfslL7N466 203 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Vps33bP59016 617 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Clca2Q8BG22 942 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Aox1O54754 1333 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Qser1A2BIE1 1698 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Tcp11l1Q8BTG3 509 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Amhr2Q8K592 568 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 FliiQ9JJ28 1271 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Uchl5Q9WUP7 329 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Gja10Q9WUS4 505 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 1700006A11RikB9EHI3 544 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Parp1P11103 1013 aaKnown RBP13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Stat5bP42232 786 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms