RNA–Protein interactions for RNA: ENSMUST00000037903.14

Pkp4-201, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,378 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-201ENSMUST00000037903 Mdh1bQ5F204 500 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Fbxo2Q80UW2 297 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Znf18Q810A1 556 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Tango6Q8C3S2 1079 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Efcc1Q9JJF6 558 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ktn1Q61595 1327 aaKnown RBP12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Gm4340L7N2C4 268 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Fam83bQ0VBM2 1012 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Krt23Q99PS0 422 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Tfcp2Q9ERA0 502 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Tbc1d4Q8BYJ6 1307 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Prr29B1ARI9 187 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ranbp6Q8BIV3 1105 aa12.98□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Wdhd1P59328 1117 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Tpm4Q6IRU2 248 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Fnbp4Q6ZQ03 1031 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ipo7Q9EPL8 1038 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ube3bQ9ES34 1070 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Mdc1Q5PSV9 1707 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Rps8P62242 208 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Nucb2P81117 420 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Pex1Q5BL07 1284 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Sun3Q5SS91 320 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Msl1Q6PDM1 616 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Pdcl2Q78Y63 240 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Atp10bB1AWN4 1474 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 A0A1W2P7S8 802 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Slc4a1P04919 929 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Trim25Q61510 634 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Cdc5lQ6A068 802 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Txndc16Q7TN22 820 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Zfp317Q8C0Q5 607 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ubac1Q8VDI7 409 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Gm20425E9Q035 978 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Api5O35841 504 aaKnown RBP12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 SrprbP47758 269 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Ccdc162pQ0VG85 912 aa12.97□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Usp44Q8C2S0 711 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Clic4Q9QYB1 253 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Atp12aQ9Z1W8 1035 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Zfp202Q8C879 641 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Bola3Q8CEI1 110 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 HmcesQ8R1M0 353 aaKnown RBP12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Spef2Q8C9J3 1734 aa12.96□□□□□ -0.33
Pkp4-201ENSMUST00000037903 Bach2P97303 839 aa12.96□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Gm28047Q3US59 414 aa12.96□□□□□ -0.34
Pkp4-201ENSMUST00000037903 CtcfQ61164 736 aaKnown RBP12.96□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Sipa1l1Q8C0T5 1782 aa12.96□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Spata31d1bE9QA57 1361 aa12.96□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Usp28Q5I043 1051 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Mroh6V9GX81 722 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Plcb3P51432 1234 aaKnown RBP12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Glg1Q61543 1175 aaKnown RBP12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Anp32cQ64G17 123 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Dnaaf4Q8R368 420 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Suclg2Q9Z2I8 433 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Clec11aO88200 328 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Sept1P42209 366 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Dnajc5P60904 198 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ankrd40Q5SUE8 363 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 AbraQ8BUZ1 375 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Eaf2Q91ZD6 262 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Tnrc6bQ8BKI2 1810 aaKnown RBP12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Mindy4Q3UQI9 744 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Srp68Q8BMA6 625 aaKnown RBP12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ankrd1Q9CR42 319 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Mrpl12Q9DB15 201 aaKnown RBP12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Znf704Q9ERQ3 566 aa12.95□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Zkscan4Q5SZT6 480 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Fam193aQ8CGI1 1231 aaKnown RBP12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Cfap45Q9D9U9 551 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 FliiQ9JJ28 1271 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Kif1aP33173 1695 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Gcom1E9PZ54 550 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 MyzapQ3UIJ9 466 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Osbpl5Q9ER64 874 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Nfe2l3Q9WTM4 660 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ncbp1Q3UYV9 790 aaKnown RBP12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Lrrcc1Q69ZB0 1026 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Clip2Q9Z0H8 1047 aa12.94□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Tuft1O08970 390 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Hip1rQ9JKY5 1068 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Setdb1O88974 1307 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Nfil3O08750 462 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Pde11aP0C1Q2 933 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Abcd1P48410 736 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Dynll1P63168 89 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ccdc174Q3U155 467 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Tmco3Q8BH01 678 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Znf428Q8C1M2 176 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 St5Q924W7 1134 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Col16a1Q8BLX7 1580 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Polr2dQ9D7M8 142 aaKnown RBP12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ripk4Q9ERK0 786 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Kcnh3Q9WVJ0 1095 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Trip6Q9Z1Y4 480 aa12.93□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Dnajc25A2ALW5 357 aa12.92□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Vmn2r23E9PXI5 849 aa12.92□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Akr1c19G3X9Y6 323 aa12.92□□□□□ -0.34
Pkp4-201ENSMUST00000037903 Ppfibp2O35711 882 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms